Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13571 and 13572 are separated by 401 nucleotides13572 and 13573 are separated by 1211 nucleotides13573 and 13574 are separated by 913 nucleotides13574 and 13575 are separated by 1015 nucleotides mRNA_5203: 13571 - K06709 KDM4, JMJD2, JHDM3 jumonji domain-containing protein 2, at 141,412 to 145,870 13571 mRNA_5204: 13572 - Hypothetical Protein, at 146,272 to 147,091 13572 mRNA_5205: 13573 - KOG0001 Ubiquitin and ubiquitin-like proteins, at 148,303 to 148,964 13573 mRNA_5206: 13574 - HMMPfam-Ubiquitin family-PF00240,ProSiteProfiles-Ubiquitin domain profile.-PS50053,SMART-Ubiquitin homologues-SM00213,SUPERFAMILY--SSF54236, at 149,878 to 151,168 13574 mRNA_5207: 13575 - KOG0001 Ubiquitin and ubiquitin-like proteins, at 152,184 to 152,471 13575
Group Condition mRNA_5203 mRNA_5204 mRNA_5205 mRNA_5206 mRNA_5207
13571 13572 13573 13574 13575
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -1.4 +0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -1.4 +0.5 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.2 -0.4 -0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.3 +0.1 -0.5 N.D.
growth on oleic acid YNB Glucose +0.3 -0.2 -0.5 +0.0 N.D.
growth on ricinoleic acid YNB Glucose +0.1 +0.4 -0.1 -0.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.2 +0.4 -0.4 N.D.
growth on oleic acid YNB Oleic Acid +0.3 -0.2 -0.0 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 +0.2 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.3 +0.6 -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.4 +0.2 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.5 +0.9 +0.0 N.D.
auxotrophy YNB Glucose +0.3 +0.5 -0.0 -0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.6 +0.5 -0.6 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.3 +0.3 +0.0 N.D.
auxotrophy Dropout Complete +0.3 +0.5 +0.0 +0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +1.1 -0.2 -0.1 N.D.
growth on ypd YPD -0.2 +1.6 +0.0 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.9 +0.3 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.8 +0.1 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.6 +0.8 +0.1 N.D.
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