Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13572 and 13573 are separated by 1211 nucleotides13573 and 13574 are separated by 913 nucleotides13574 and 13575 are separated by 1015 nucleotides13575 and 13576 are separated by 35 nucleotides mRNA_5204: 13572 - Hypothetical Protein, at 146,272 to 147,091 13572 mRNA_5205: 13573 - KOG0001 Ubiquitin and ubiquitin-like proteins, at 148,303 to 148,964 13573 mRNA_5206: 13574 - HMMPfam-Ubiquitin family-PF00240,ProSiteProfiles-Ubiquitin domain profile.-PS50053,SMART-Ubiquitin homologues-SM00213,SUPERFAMILY--SSF54236, at 149,878 to 151,168 13574 mRNA_5207: 13575 - KOG0001 Ubiquitin and ubiquitin-like proteins, at 152,184 to 152,471 13575 mRNA_5208: 13576 - Hypothetical Protein, at 152,507 to 152,935 13576
Group Condition mRNA_5204 mRNA_5205 mRNA_5206 mRNA_5207 mRNA_5208
13572 13573 13574 13575 13576
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.4 +0.5 -0.1 N.D. -0.3
growth on oleic acid YNB Glucose -0.2 -0.5 +0.0 N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -1.4 +0.1 -0.1 N.D. +0.6
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.4 -0.3 N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.4 -0.4 N.D. -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.1 -0.5 N.D. +0.3
growth on ricinoleic acid YNB Glucose +0.4 -0.1 -0.5 N.D. -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.6 -0.1 N.D. -0.4
growth on oleic acid YNB Oleic Acid -0.2 -0.0 +0.0 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 +0.9 +0.0 N.D. -0.4
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.3 +0.0 N.D. -0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.2 +0.2 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 +0.5 -0.6 N.D. -0.1
auxotrophy YNB Glucose +0.5 -0.0 -0.3 N.D. +0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 +0.2 -0.0 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 +0.8 +0.1 N.D. -0.7
facs on lipid accumulation Sorted No BODIPY Gate +1.1 -0.2 -0.1 N.D. +0.2
auxotrophy Dropout Complete +0.5 +0.0 +0.2 N.D. +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.9 +0.3 +0.2 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine +0.8 +0.1 +0.3 N.D. +0.2
growth on ypd YPD +1.6 +0.0 -0.2 N.D. +0.4
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