Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13575 and 13576 are separated by 35 nucleotides13576 and 13577 are separated by 445 nucleotides13577 and 13578 are separated by 925 nucleotides13578 and 13579 are separated by 385 nucleotides mRNA_5207: 13575 - KOG0001 Ubiquitin and ubiquitin-like proteins, at 152,184 to 152,471 13575 mRNA_5208: 13576 - Hypothetical Protein, at 152,507 to 152,935 13576 mRNA_5209: 13577 - K03257 EIF4A translation initiation factor 4A, at 153,381 to 155,810 13577 mRNA_5210: 13578 - KOG3221 Glycolipid transfer protein, at 156,736 to 157,976 13578 mRNA_5211: 13579 - BLAST related to UPF0768 protein YBL029C-A [Zygosaccharomyc..., at 158,362 to 159,031 13579
Group Condition mRNA_5207 mRNA_5208 mRNA_5209 mRNA_5210 mRNA_5211
13575 13576 13577 13578 13579
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 N.D. -2.3 +0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.3 N.D. -2.3 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.6 N.D. -1.8 -0.1
growth on oleic acid YNB Glucose N.D. -0.3 N.D. -0.1 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.4 N.D. -0.9 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 N.D. -0.7 -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 N.D. -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.4 N.D. -0.1 +0.3
growth on oleic acid YNB Oleic Acid N.D. -0.1 N.D. +0.4 -0.6
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 N.D. -0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.3 N.D. -0.3 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.7 N.D. +0.4 +0.3
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 N.D. -0.2 +0.3
auxotrophy YNB Glucose N.D. +0.5 N.D. -0.1 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.3 N.D. +0.6 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 N.D. +0.0 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.6 N.D. +0.9 +0.3
growth on ricinoleic acid YNB Glucose N.D. -0.2 N.D. +0.7 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 N.D. +0.3 +0.3
auxotrophy Dropout Complete N.D. +0.4 N.D. +0.7 -0.3
growth on ypd YPD N.D. +0.4 N.D. +0.0 +0.7
remove
mRNA_5207
plot
remove
mRNA_5208
plot
remove
mRNA_5209
remove
mRNA_5210
plot
remove
mRNA_5211
plot