Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13578 and 13579 are separated by 385 nucleotides
13579 and 13580 are separated by 603 nucleotides
13580 and 13581 are separated by 624 nucleotides
13581 and 13582 are separated by 194 nucleotides
mRNA_5210: 13578 - KOG3221 Glycolipid transfer protein, at 156,736 to 157,976
13578
mRNA_5211: 13579 - BLAST related to UPF0768 protein YBL029C-A [Zygosaccharomyc..., at 158,362 to 159,031
13579
mRNA_5212: 13580 - K00624 E2.3.1.7 carnitine O-acetyltransferase, at 159,635 to 162,568
13580
mRNA_5213: 13581 - Hypothetical Protein, at 163,193 to 164,200
13581
mRNA_5214: 13582 - K03845 ALG3 alpha-1,3-mannosyltransferase, at 164,395 to 166,467
13582
Group
Condition
mRNA
_5210
mRNA
_5211
mRNA
_5212
mRNA
_5213
mRNA
_5214
13578
13579
13580
13581
13582
facs on lipid accumulation
Sorted No BODIPY Gate
-2.3
+0.0
+0.1
-0.1
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-2.3
+0.3
-0.1
+0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.8
-0.1
+0.1
+0.2
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.7
-0.0
+0.4
+0.1
-1.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.9
+0.3
-0.4
+0.4
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.2
+0.1
-0.2
-0.2
auxotrophy
YNB Glucose
-0.1
+0.0
+0.2
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.3
-0.2
+0.1
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
+0.3
+0.3
-0.4
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.1
+0.2
+0.1
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.3
+0.2
+0.1
-0.2
growth on oleic acid
YNB Glucose
-0.1
-0.6
+0.3
+0.4
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+0.5
-0.3
+0.3
+0.1
growth on oleic acid
YNB Oleic Acid
+0.4
-0.6
-0.0
+0.4
+0.4
auxotrophy
Dropout Complete
+0.7
-0.3
+0.2
-0.0
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.3
+0.3
-0.0
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
+0.3
-0.2
+0.4
-0.1
growth on ypd
YPD
+0.0
+0.7
+0.4
-0.1
+0.1
growth on ricinoleic acid
YNB Glucose
+0.7
+0.1
+0.5
+0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.9
+0.3
+0.4
+0.2
-0.5
ypd buoyancy
40 hrs Low Buoyancy
+0.6
+0.1
+0.2
+0.1
+0.2
remove
mRNA_5210
plot
remove
mRNA_5211
plot
remove
mRNA_5212
remove
mRNA_5213
plot
remove
mRNA_5214
plot