Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13579 and 13580 are separated by 603 nucleotides13580 and 13581 are separated by 624 nucleotides13581 and 13582 are separated by 194 nucleotides13582 and 13583 are separated by 146 nucleotides mRNA_5211: 13579 - BLAST related to UPF0768 protein YBL029C-A [Zygosaccharomyc..., at 158,362 to 159,031 13579 mRNA_5212: 13580 - K00624 E2.3.1.7 carnitine O-acetyltransferase, at 159,635 to 162,568 13580 mRNA_5213: 13581 - Hypothetical Protein, at 163,193 to 164,200 13581 mRNA_5214: 13582 - K03845 ALG3 alpha-1,3-mannosyltransferase, at 164,395 to 166,467 13582 mRNA_5215: 13583 - KOG1940 Zn-finger protein, at 166,614 to 167,435 13583
Group Condition mRNA_5211 mRNA_5212 mRNA_5213 mRNA_5214 mRNA_5215
13579 13580 13581 13582 13583
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.1 -0.2 -0.2 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.4 +0.1 -1.3 +0.2
auxotrophy Dropout Complete -0.3 +0.2 -0.0 -0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.4 +0.2 -0.5 -0.7
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.2 +0.1 +0.0 -0.2
growth on oleic acid YNB Oleic Acid -0.6 -0.0 +0.4 +0.4 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.0 -0.1 +0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.1 -0.1 -0.2 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.3 -0.4 -0.3 +0.2
auxotrophy YNB Glucose +0.0 +0.2 -0.2 -0.1 +0.2
growth on oleic acid YNB Glucose -0.6 +0.3 +0.4 +0.3 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.2 +0.1 -0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.2 +0.1 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.4 +0.4 -0.1 +0.4
growth on ricinoleic acid YNB Glucose +0.1 +0.5 +0.1 -0.2 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.2 +0.1 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.2 +0.4 -0.1 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.1 +0.2 -0.0 +0.8
growth on ypd YPD +0.7 +0.4 -0.1 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 -0.3 +0.3 +0.1 +0.6
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.1 +0.2 -0.1 +1.1
remove
mRNA_5211
plot
remove
mRNA_5212
plot
remove
mRNA_5213
remove
mRNA_5214
plot
remove
mRNA_5215
plot