Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13582 and 13583 are separated by 146 nucleotides13583 and 13585 are separated by 315 nucleotides13585 and 13584 are separated by 698 nucleotides13584 and 13586 are separated by 131 nucleotides mRNA_5214: 13582 - K03845 ALG3 alpha-1,3-mannosyltransferase, at 164,395 to 166,467 13582 mRNA_5215: 13583 - KOG1940 Zn-finger protein, at 166,614 to 167,435 13583 mRNA_5217: 13585 - Hypothetical Protein, at 167,751 to 168,514 13585 mRNA_5216: 13584 - K04648 DCTN1 dynactin 1, at 169,213 to 174,465 13584 mRNA_5218: 13586 - HMMPfam-RNA12 protein-PF10443,SUPERFAMILY--SSF52540,SUPERFAMILY--SSF54928, at 174,597 to 177,713 13586
Group Condition mRNA_5214 mRNA_5215 mRNA_5217 mRNA_5216 mRNA_5218
13582 13583 13585 13584 13586
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.7 -0.3 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.4 -0.3 -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.3 +0.4 -0.1 -0.2
auxotrophy Dropout Complete -0.0 -0.2 +0.2 -0.0 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.2 +1.0 -0.9 -0.1
auxotrophy YNB Glucose -0.1 +0.2 +0.1 -0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.2 +0.2 -0.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.2 +0.3 -1.0 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -1.3 +0.2 -0.1 +0.6 +0.7
growth on oleic acid YNB Oleic Acid +0.4 -0.1 -0.3 +0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.2 -0.1 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.6 -0.5 +0.2 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.1 +0.4 +0.3 -0.3
growth on ypd YPD +0.1 +0.1 +0.2 -0.5 +0.3
growth on oleic acid YNB Glucose +0.3 -0.3 -0.1 +0.3 +0.0
growth on ricinoleic acid YNB Glucose -0.2 +0.3 -0.1 +0.3 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.4 +0.0 +0.5 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.3 +0.2 +0.6 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.3 +0.6 +0.4 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.8 +0.8 +0.8 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +1.1 +0.1 +0.8 +0.3
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