Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13584 and 13586 are separated by 131 nucleotides13586 and 13587 are separated by 187 nucleotides13587 and 13588 are separated by 254 nucleotides13588 and 13589 are separated by 1262 nucleotides mRNA_5216: 13584 - K04648 DCTN1 dynactin 1, at 169,213 to 174,465 13584 mRNA_5218: 13586 - HMMPfam-RNA12 protein-PF10443,SUPERFAMILY--SSF52540,SUPERFAMILY--SSF54928, at 174,597 to 177,713 13586 mRNA_5219: 13587 - Hypothetical Protein, at 177,901 to 180,149 13587 mRNA_5220: 13588 - K09241 GAL4 transcriptional regulatory protein GAL4, at 180,404 to 182,796 13588 mRNA_5221: 13589 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 184,059 to 187,472 13589
Group Condition mRNA_5216 mRNA_5218 mRNA_5219 mRNA_5220 mRNA_5221
13584 13586 13587 13588 13589
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 -0.1 +0.1 -0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2 -0.2 -0.4 -0.0
ypd buoyancy 40 hrs Low Buoyancy -1.0 +0.2 +0.2 -0.1 -0.1
auxotrophy Dropout Complete -0.0 -0.2 +0.1 -0.3 -0.1
auxotrophy YNB Glucose -0.0 -0.2 -0.1 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.1 -0.1 +0.2 -0.1
growth on oleic acid YNB Oleic Acid +0.3 -0.2 -0.2 -0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.2 +0.2 -0.2 -0.1
growth on ypd YPD -0.5 +0.3 -0.0 +0.0 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.3 -0.0 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.3 -0.2 +0.3 +0.0
growth on oleic acid YNB Glucose +0.3 +0.0 -0.1 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.1 -0.2 +0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.2 +0.3 -0.0 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.6 +0.0 +0.1 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 -0.2 +0.1 +0.3 +0.0
growth on ricinoleic acid YNB Glucose +0.3 +0.3 +0.0 +0.0 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.8 -0.1 +0.1 +0.3 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -0.1 +0.2 +0.4 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 +0.7 +0.0 -0.2 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.8 +0.3 +0.1 +0.2 -0.1
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