Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13586 and 13587 are separated by 187 nucleotides13587 and 13588 are separated by 254 nucleotides13588 and 13589 are separated by 1262 nucleotides13589 and 13590 are separated by 265 nucleotides mRNA_5218: 13586 - HMMPfam-RNA12 protein-PF10443,SUPERFAMILY--SSF52540,SUPERFAMILY--SSF54928, at 174,597 to 177,713 13586 mRNA_5219: 13587 - Hypothetical Protein, at 177,901 to 180,149 13587 mRNA_5220: 13588 - K09241 GAL4 transcriptional regulatory protein GAL4, at 180,404 to 182,796 13588 mRNA_5221: 13589 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 184,059 to 187,472 13589 mRNA_5222: 13590 - Hypothetical Protein, at 187,738 to 188,641 13590
Group Condition mRNA_5218 mRNA_5219 mRNA_5220 mRNA_5221 mRNA_5222
13586 13587 13588 13589 13590
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.1 -0.2 -0.2 -1.8
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.3 -0.0 -0.0 -1.7
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.1 +0.0 -0.1 -0.8
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.2 -0.1 -0.1 -1.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 +0.0 -0.2 +0.2 -1.3
auxotrophy Dropout Complete -0.2 +0.1 -0.3 -0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.2 -0.2 -0.1 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.2 -0.4 -0.0 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.2 +0.3 +0.0 -0.2
growth on ricinoleic acid YNB Glucose +0.3 +0.0 +0.0 +0.1 -0.8
growth on oleic acid YNB Oleic Acid -0.2 -0.2 -0.2 -0.1 +0.5
growth on oleic acid YNB Glucose +0.0 -0.1 -0.2 +0.1 +0.3
auxotrophy YNB Glucose -0.2 -0.1 -0.1 +0.0 +0.6
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.0 +0.0 -0.0 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.1 +0.3 +0.0 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.1 +0.2 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 +0.2 -0.1 +0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.1 +0.3 -0.2 +0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.2 +0.4 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.2 +0.3 -0.1 +0.8
growth on ypd YPD +0.3 -0.0 +0.0 +0.0 +2.4
remove
mRNA_5218
plot
remove
mRNA_5219
plot
remove
mRNA_5220
remove
mRNA_5221
plot
remove
mRNA_5222
plot