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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13587 and 13588 are separated by 254 nucleotides
13588 and 13589 are separated by 1262 nucleotides
13589 and 13590 are separated by 265 nucleotides
13590 and 13591 are separated by 422 nucleotides
mRNA_5219: 13587 - Hypothetical Protein, at 177,901 to 180,149
13587
mRNA_5220: 13588 - K09241 GAL4 transcriptional regulatory protein GAL4, at 180,404 to 182,796
13588
mRNA_5221: 13589 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 184,059 to 187,472
13589
mRNA_5222: 13590 - Hypothetical Protein, at 187,738 to 188,641
13590
mRNA_5223: 13591 - Hypothetical Protein, at 189,064 to 190,572
13591
Group
Condition
mRNA
_5219
mRNA
_5220
mRNA
_5221
mRNA
_5222
mRNA
_5223
13587
13588
13589
13590
13591
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-0.2
-0.2
-1.8
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.0
-0.0
-1.7
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
-0.2
+0.2
-1.3
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.1
-0.1
-1.0
-0.1
growth on ricinoleic acid
YNB Glucose
+0.0
+0.0
+0.1
-0.8
-0.3
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.0
-0.1
-0.8
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.2
-0.1
-0.4
+0.0
auxotrophy
Dropout Complete
+0.1
-0.3
-0.1
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.3
+0.0
-0.2
-0.2
growth on oleic acid
YNB Glucose
-0.1
-0.2
+0.1
+0.3
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.4
-0.0
+0.4
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.2
-0.1
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
-0.2
-0.2
-0.1
+0.5
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.3
+0.0
+0.2
-0.4
auxotrophy
YNB Glucose
-0.1
-0.1
+0.0
+0.6
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.2
-0.1
+0.7
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.0
-0.0
+0.6
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.3
-0.1
+0.8
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.4
+0.0
+0.2
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.3
-0.2
+0.6
+0.0
growth on ypd
YPD
-0.0
+0.0
+0.0
+2.4
-0.1
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