Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13588 and 13589 are separated by 1262 nucleotides13589 and 13590 are separated by 265 nucleotides13590 and 13591 are separated by 422 nucleotides13591 and 13592 are separated by 324 nucleotides mRNA_5220: 13588 - K09241 GAL4 transcriptional regulatory protein GAL4, at 180,404 to 182,796 13588 mRNA_5221: 13589 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 184,059 to 187,472 13589 mRNA_5222: 13590 - Hypothetical Protein, at 187,738 to 188,641 13590 mRNA_5223: 13591 - Hypothetical Protein, at 189,064 to 190,572 13591 mRNA_5224: 13592 - KOG0001 Ubiquitin and ubiquitin-like proteins, at 190,897 to 192,363 13592
Group Condition mRNA_5220 mRNA_5221 mRNA_5222 mRNA_5223 mRNA_5224
13588 13589 13590 13591 13592
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.0 -1.7 -0.3 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.2 -1.8 +0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.2 -1.3 -0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -1.0 -0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 -0.8 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 -0.4 +0.0 -0.2
growth on ricinoleic acid YNB Glucose +0.0 +0.1 -0.8 -0.3 +0.1
auxotrophy Dropout Complete -0.3 -0.1 -0.0 -0.0 -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.1 -0.2 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.0 -0.2 -0.2 -0.1
growth on oleic acid YNB Glucose -0.2 +0.1 +0.3 -0.3 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.0 +0.2 -0.4 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.0 +0.4 +0.1 +0.1
growth on oleic acid YNB Oleic Acid -0.2 -0.1 +0.5 -0.0 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.4 +0.0 +0.2 -0.3 -0.0
auxotrophy YNB Glucose -0.1 +0.0 +0.6 -0.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.2 +0.6 +0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.0 +0.6 +0.0 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.1 +0.7 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.1 +0.8 -0.3 +0.0
growth on ypd YPD +0.0 +0.0 +2.4 -0.1 +0.1
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