Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13590 and 13591 are separated by 422 nucleotides13591 and 13592 are separated by 324 nucleotides13592 and 13593 are separated by 264 nucleotides13593 and 13594 are separated by 344 nucleotides mRNA_5222: 13590 - Hypothetical Protein, at 187,738 to 188,641 13590 mRNA_5223: 13591 - Hypothetical Protein, at 189,064 to 190,572 13591 mRNA_5224: 13592 - KOG0001 Ubiquitin and ubiquitin-like proteins, at 190,897 to 192,363 13592 mRNA_5225: 13593 - HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899, at 192,628 to 196,368 13593 mRNA_5226: 13594 - K12472 EPS15 epidermal growth factor receptor substrate 15, at 196,713 to 201,520 13594
Group Condition mRNA_5222 mRNA_5223 mRNA_5224 mRNA_5225 mRNA_5226
13590 13591 13592 13593 13594
growth on ricinoleic acid YNB Methylricinoleic Acid -1.7 -0.3 +0.0 +0.1 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -1.8 +0.3 -0.1 -0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -1.3 -0.2 +0.1 +0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 -0.3 -0.1 -0.6
ypd buoyancy 40 hrs Low Buoyancy -1.0 -0.1 -0.0 -0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.8 +0.1 -0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.2 -0.1 -0.0 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.4 +0.0 -0.2 -0.1 -0.2
growth on ricinoleic acid YNB Glucose -0.8 -0.3 +0.1 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.4 -0.0 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.3 -0.0 +0.1 -0.3
auxotrophy Dropout Complete -0.0 -0.0 -0.0 +0.1 -0.0
growth on oleic acid YNB Glucose +0.3 -0.3 -0.0 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 -0.1 -0.0 -0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 +0.0 -0.1 +0.1 -0.0
growth on oleic acid YNB Oleic Acid +0.5 -0.0 +0.1 -0.1 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.1 +0.1 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.8 -0.3 +0.0 +0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.6 +0.0 +0.0 +0.2 +0.1
auxotrophy YNB Glucose +0.6 -0.2 +0.1 +0.1 +0.3
growth on ypd YPD +2.4 -0.1 +0.1 +0.0 +0.1
remove
mRNA_5222
plot
remove
mRNA_5223
plot
remove
mRNA_5224
remove
mRNA_5225
plot
remove
mRNA_5226
plot