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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13590 and 13591 are separated by 422 nucleotides
13591 and 13592 are separated by 324 nucleotides
13592 and 13593 are separated by 264 nucleotides
13593 and 13594 are separated by 344 nucleotides
mRNA_5222: 13590 - Hypothetical Protein, at 187,738 to 188,641
13590
mRNA_5223: 13591 - Hypothetical Protein, at 189,064 to 190,572
13591
mRNA_5224: 13592 - KOG0001 Ubiquitin and ubiquitin-like proteins, at 190,897 to 192,363
13592
mRNA_5225: 13593 - HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899, at 192,628 to 196,368
13593
mRNA_5226: 13594 - K12472 EPS15 epidermal growth factor receptor substrate 15, at 196,713 to 201,520
13594
Group
Condition
mRNA
_5222
mRNA
_5223
mRNA
_5224
mRNA
_5225
mRNA
_5226
13590
13591
13592
13593
13594
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.7
-0.3
+0.0
+0.1
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-1.8
+0.3
-0.1
-0.0
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.3
-0.2
+0.1
+0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.1
-0.3
-0.1
-0.6
ypd buoyancy
40 hrs Low Buoyancy
-1.0
-0.1
-0.0
-0.0
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.8
+0.1
-0.1
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.2
-0.1
-0.0
-0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.4
+0.0
-0.2
-0.1
-0.2
growth on ricinoleic acid
YNB Glucose
-0.8
-0.3
+0.1
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.4
-0.0
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.3
-0.0
+0.1
-0.3
auxotrophy
Dropout Complete
-0.0
-0.0
-0.0
+0.1
-0.0
growth on oleic acid
YNB Glucose
+0.3
-0.3
-0.0
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.7
-0.1
-0.0
-0.1
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.6
+0.0
-0.1
+0.1
-0.0
growth on oleic acid
YNB Oleic Acid
+0.5
-0.0
+0.1
-0.1
+0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.4
+0.1
+0.1
+0.0
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.8
-0.3
+0.0
+0.2
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.6
+0.0
+0.0
+0.2
+0.1
auxotrophy
YNB Glucose
+0.6
-0.2
+0.1
+0.1
+0.3
growth on ypd
YPD
+2.4
-0.1
+0.1
+0.0
+0.1
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