Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13591 and 13592 are separated by 324 nucleotides13592 and 13593 are separated by 264 nucleotides13593 and 13594 are separated by 344 nucleotides13594 and 13595 are separated by 168 nucleotides mRNA_5223: 13591 - Hypothetical Protein, at 189,064 to 190,572 13591 mRNA_5224: 13592 - KOG0001 Ubiquitin and ubiquitin-like proteins, at 190,897 to 192,363 13592 mRNA_5225: 13593 - HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899, at 192,628 to 196,368 13593 mRNA_5226: 13594 - K12472 EPS15 epidermal growth factor receptor substrate 15, at 196,713 to 201,520 13594 mRNA_5227: 13595 - K00601 E2.1.2.2 phosphoribosylglycinamide formyltransferase, at 201,689 to 202,738 13595
Group Condition mRNA_5223 mRNA_5224 mRNA_5225 mRNA_5226 mRNA_5227
13591 13592 13593 13594 13595
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.3 -0.1 -0.6 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1 -0.0 -0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.0 +0.1 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.0 -0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.0 -0.1 -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.2 -0.1 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 -0.1 -0.1 N.D.
growth on oleic acid YNB Glucose -0.3 -0.0 -0.0 +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.1 +0.0 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 -0.0 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.1 +0.1 -0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.0 +0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.0 +0.2 +0.1 N.D.
auxotrophy Dropout Complete -0.0 -0.0 +0.1 -0.0 N.D.
growth on oleic acid YNB Oleic Acid -0.0 +0.1 -0.1 +0.0 N.D.
growth on ricinoleic acid YNB Glucose -0.3 +0.1 +0.1 +0.1 N.D.
growth on ypd YPD -0.1 +0.1 +0.0 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.1 +0.0 -0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.1 -0.0 -0.1 N.D.
auxotrophy YNB Glucose -0.2 +0.1 +0.1 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.0 +0.2 +0.1 N.D.
remove
mRNA_5223
plot
remove
mRNA_5224
plot
remove
mRNA_5225
remove
mRNA_5226
plot
remove
mRNA_5227
plot