Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13593 and 13594 are separated by 344 nucleotides13594 and 13595 are separated by 168 nucleotides13595 and 13596 are separated by 370 nucleotides13596 and 13597 are separated by 117 nucleotides mRNA_5225: 13593 - HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899, at 192,628 to 196,368 13593 mRNA_5226: 13594 - K12472 EPS15 epidermal growth factor receptor substrate 15, at 196,713 to 201,520 13594 mRNA_5227: 13595 - K00601 E2.1.2.2 phosphoribosylglycinamide formyltransferase, at 201,689 to 202,738 13595 mRNA_5228: 13596 - HMMPfam-Mis6-PF07778, at 203,109 to 206,278 13596 mRNA_5229: 13597 - SUPERFAMILY--SSF51445, at 206,396 to 208,003 13597
Group Condition mRNA_5225 mRNA_5226 mRNA_5227 mRNA_5228 mRNA_5229
13593 13594 13595 13596 13597
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.1 N.D. -0.7 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.6 N.D. +0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 N.D. -0.1 -0.1
auxotrophy Dropout Complete +0.1 -0.0 N.D. -0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 N.D. +0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.5 N.D. +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.1 N.D. -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.3 N.D. +0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 N.D. +0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.3 N.D. +0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.0 N.D. -0.0 -0.1
growth on oleic acid YNB Glucose -0.0 +0.1 N.D. -0.1 -0.1
auxotrophy YNB Glucose +0.1 +0.3 N.D. -0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.1 N.D. +0.4 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.0 N.D. +0.2 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.1 N.D. -0.0 -0.0
growth on oleic acid YNB Oleic Acid -0.1 +0.0 N.D. +0.2 +0.0
growth on ricinoleic acid YNB Glucose +0.1 +0.1 N.D. +0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.2 N.D. +0.1 -0.1
growth on ypd YPD +0.0 +0.1 N.D. +0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.1 N.D. +0.1 +0.1
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