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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13594 and 13595 are separated by 168 nucleotides
13595 and 13596 are separated by 370 nucleotides
13596 and 13597 are separated by 117 nucleotides
13597 and 13598 are separated by 1412 nucleotides
mRNA_5226: 13594 - K12472 EPS15 epidermal growth factor receptor substrate 15, at 196,713 to 201,520
13594
mRNA_5227: 13595 - K00601 E2.1.2.2 phosphoribosylglycinamide formyltransferase, at 201,689 to 202,738
13595
mRNA_5228: 13596 - HMMPfam-Mis6-PF07778, at 203,109 to 206,278
13596
mRNA_5229: 13597 - SUPERFAMILY--SSF51445, at 206,396 to 208,003
13597
mRNA_5230: 13598 - K17906 ATG2 autophagy-related protein 2, at 209,416 to 215,994
13598
Group
Condition
mRNA
_5226
mRNA
_5227
mRNA
_5228
mRNA
_5229
mRNA
_5230
13594
13595
13596
13597
13598
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
N.D.
+0.0
+0.1
-2.7
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
N.D.
+0.2
-0.1
-1.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
N.D.
+0.1
+0.1
-1.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
N.D.
-0.7
-0.6
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
N.D.
+0.4
-0.2
-0.6
auxotrophy
Dropout Complete
-0.0
N.D.
-0.3
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
N.D.
+0.1
+0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
N.D.
+0.1
-0.3
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
N.D.
-0.1
-0.2
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
N.D.
-0.1
-0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
N.D.
+0.1
-0.2
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
N.D.
+0.1
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
N.D.
-0.0
-0.1
+0.2
growth on oleic acid
YNB Glucose
+0.1
N.D.
-0.1
-0.1
+0.1
growth on ypd
YPD
+0.1
N.D.
+0.1
-0.0
-0.0
growth on ricinoleic acid
YNB Glucose
+0.1
N.D.
+0.1
-0.1
+0.1
auxotrophy
YNB Glucose
+0.3
N.D.
-0.2
-0.1
+0.4
auxotrophy
YNB Glucose 75mM Arginine
+0.1
N.D.
-0.0
-0.0
+0.3
growth on oleic acid
YNB Oleic Acid
+0.0
N.D.
+0.2
+0.0
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
N.D.
+0.1
+0.1
+0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
N.D.
+0.2
-0.2
+0.8
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