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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13595 and 13596 are separated by 370 nucleotides
13596 and 13597 are separated by 117 nucleotides
13597 and 13598 are separated by 1412 nucleotides
13598 and 13599 are separated by 506 nucleotides
mRNA_5227: 13595 - K00601 E2.1.2.2 phosphoribosylglycinamide formyltransferase, at 201,689 to 202,738
13595
mRNA_5228: 13596 - HMMPfam-Mis6-PF07778, at 203,109 to 206,278
13596
mRNA_5229: 13597 - SUPERFAMILY--SSF51445, at 206,396 to 208,003
13597
mRNA_5230: 13598 - K17906 ATG2 autophagy-related protein 2, at 209,416 to 215,994
13598
mRNA_5231: 13599 - Hypothetical Protein, at 216,501 to 218,178
13599
Group
Condition
mRNA
_5227
mRNA
_5228
mRNA
_5229
mRNA
_5230
mRNA
_5231
13595
13596
13597
13598
13599
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.0
+0.1
-2.7
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.7
-0.6
-0.0
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.1
+0.1
-1.5
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.2
-0.1
-1.5
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.4
-0.2
-0.6
-0.0
auxotrophy
Dropout Complete
N.D.
-0.3
-0.1
+0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.1
-0.3
+0.0
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.1
-0.1
-0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
-0.2
+0.0
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.1
-0.2
+0.1
+0.1
growth on oleic acid
YNB Glucose
N.D.
-0.1
-0.1
+0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.1
+0.1
-0.0
-0.0
growth on ypd
YPD
N.D.
+0.1
-0.0
-0.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.1
-0.1
+0.1
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
-0.1
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.0
-0.0
+0.3
+0.2
auxotrophy
YNB Glucose
N.D.
-0.2
-0.1
+0.4
+0.4
growth on oleic acid
YNB Oleic Acid
N.D.
+0.2
+0.0
+0.1
+0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.0
-0.1
+0.2
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.2
-0.2
+0.8
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.1
+0.1
+0.5
+0.0
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