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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13597 and 13598 are separated by 1412 nucleotides
13598 and 13599 are separated by 506 nucleotides
13599 and 13600 are separated by 512 nucleotides
13600 and 13601 are separated by 968 nucleotides
mRNA_5229: 13597 - SUPERFAMILY--SSF51445, at 206,396 to 208,003
13597
mRNA_5230: 13598 - K17906 ATG2 autophagy-related protein 2, at 209,416 to 215,994
13598
mRNA_5231: 13599 - Hypothetical Protein, at 216,501 to 218,178
13599
mRNA_5232: 13600 - SUPERFAMILY--SSF52047, at 218,691 to 220,745
13600
mRNA_5233: 13601 - HMMPfam-Transmembrane amino acid transporter protein-PF01490, at 221,714 to 224,141
13601
Group
Condition
mRNA
_5229
mRNA
_5230
mRNA
_5231
mRNA
_5232
mRNA
_5233
13597
13598
13599
13600
13601
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-2.7
-0.1
-1.0
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-1.5
+0.1
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-1.5
+0.1
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.6
-0.0
-0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-0.0
-0.3
+0.2
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.0
-0.0
-0.0
-0.1
auxotrophy
Dropout Complete
-0.1
+0.1
+0.1
-0.1
+0.1
growth on oleic acid
YNB Glucose
-0.1
+0.1
-0.0
+0.0
+0.0
growth on ypd
YPD
-0.0
-0.0
+0.1
+0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.0
-0.0
+0.1
+0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.2
+0.4
-0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
+0.1
+0.1
+0.2
+0.1
growth on oleic acid
YNB Oleic Acid
+0.0
+0.1
+0.2
-0.0
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.2
-0.1
+0.4
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.1
+0.1
+0.3
+0.3
auxotrophy
YNB Glucose
-0.1
+0.4
+0.4
-0.1
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
+0.8
-0.2
+0.3
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.3
+0.2
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.5
+0.0
+0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
+0.1
+0.1
+0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.0
+0.0
+0.3
+0.8
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