Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13601 and 13602 are separated by 758 nucleotides13602 and 13603 are separated by 514 nucleotides13603 and 13604 are separated by 203 nucleotides13604 and 13605 are separated by 311 nucleotides mRNA_5233: 13601 - HMMPfam-Transmembrane amino acid transporter protein-PF01490, at 221,714 to 224,141 13601 mRNA_5234: 13602 - KOG0725 Reductases with broad range of substrate specificities, at 224,900 to 226,337 13602 mRNA_5235: 13603 - KOG1178 Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes, at 226,852 to 231,804 13603 mRNA_5236: 13604 - KOG2031 Tyrosyl-DNA phosphodiesterase, at 232,008 to 233,871 13604 mRNA_5237: 13605 - K02914 RP-L34, MRPL34, rpmH large subunit ribosomal protein L34, at 234,183 to 234,602 13605
Group Condition mRNA_5233 mRNA_5234 mRNA_5235 mRNA_5236 mRNA_5237
13601 13602 13603 13604 13605
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.4 -0.1 -0.0 N.D.
growth on ypd YPD -0.0 -0.8 -0.2 +0.6 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.2 -0.2 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.5 -0.4 -0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.5 -0.1 -0.3 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.6 -0.1 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.5 +0.2 -0.1 -0.3 N.D.
auxotrophy Dropout Complete +0.1 +0.3 -0.0 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.5 -0.1 +0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.5 +0.1 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.3 -0.1 +0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.1 +0.4 -0.1 +0.1 N.D.
growth on oleic acid YNB Glucose +0.0 +0.6 +0.2 -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.2 -0.0 +0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.8 +0.4 +0.0 -0.6 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.8 +0.1 -0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.8 -0.1 -0.2 N.D.
auxotrophy YNB Glucose +0.2 +0.7 -0.1 +0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +1.2 -0.1 -0.2 N.D.
growth on ricinoleic acid YNB Glucose +0.1 +1.2 +0.1 +0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +1.7 -0.1 +0.1 N.D.
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