Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13615 and 13616 are separated by 804 nucleotides13616 and 13617 are separated by 449 nucleotides13617 and 13618 are separated by 2732 nucleotides13618 and 13619 are separated by 197 nucleotides mRNA_5247: 13615 - HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 256,939 to 258,074 13615 mRNA_5248: 13616 - KOG2084 Predicted histone tail methylase containing SET domain, at 258,879 to 260,199 13616 mRNA_5249: 13617 - K01535 PMA1, PMA2 H+-transporting ATPase, at 260,649 to 264,628 13617 mRNA_5250: 13618 - SUPERFAMILY--SSF101898, at 267,361 to 271,776 13618 mRNA_5251: 13619 - K12867 SYF1, XAB2 pre-mRNA-splicing factor SYF1, at 271,974 to 275,743 13619
Group Condition mRNA_5247 mRNA_5248 mRNA_5249 mRNA_5250 mRNA_5251
13615 13616 13617 13618 13619
auxotrophy YNB Glucose -0.5 -0.3 N.D. +0.1 -1.5
auxotrophy Dropout Complete -0.4 -0.2 N.D. +0.1 -1.2
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.0 N.D. +0.1 -1.2
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.1 N.D. +0.1 -0.8
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.3 N.D. -0.1 -0.9
growth on ypd YPD +0.3 -0.2 N.D. +0.0 -1.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.3 N.D. -0.0 -1.3
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.3 N.D. -0.1 -0.8
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.5 N.D. -0.1 -0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.1 N.D. +0.2 -1.0
growth on oleic acid YNB Oleic Acid -0.1 -0.2 N.D. -0.1 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.2 N.D. +0.2 -1.1
growth on ricinoleic acid YNB Glucose -0.0 +0.2 N.D. +0.0 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -0.3 N.D. -0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.4 N.D. +0.2 -0.1
growth on oleic acid YNB Glucose -0.0 +0.0 N.D. -0.1 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.2 N.D. +0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.1 N.D. +0.1 +1.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1 N.D. +0.1 +0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.0 N.D. +0.2 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1 N.D. +0.2 +1.5
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