Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13620 and 13621 are separated by 380 nucleotides13621 and 13622 are separated by 716 nucleotides13622 and 13623 are separated by 289 nucleotides13623 and 13624 are separated by 1804 nucleotides mRNA_5252: 13620 - BLAST LPS-assembly protein LptD [Rhizoctonia solani], at 276,429 to 278,610 13620 mRNA_5253: 13621 - Hypothetical Protein, at 278,991 to 279,822 13621 mRNA_5254: 13622 - HMMPfam-10 TM Acyl Transferase domain found in Cas1p-PF07779,HMMPfam-GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p-PF13839, at 280,539 to 283,748 13622 mRNA_5255: 13623 - K12604 CNOT1, NOT1 CCR4-NOT transcription complex subunit 1, at 284,038 to 290,339 13623 mRNA_5256: 13624 - SUPERFAMILY--SSF53448, at 292,144 to 293,863 13624
Group Condition mRNA_5252 mRNA_5253 mRNA_5254 mRNA_5255 mRNA_5256
13620 13621 13622 13623 13624
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.2 +0.6 N.D. -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.3 -0.4 N.D. +0.7
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.1 -0.2 N.D. -0.3
auxotrophy Dropout Complete -0.2 -0.4 +0.0 N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.3 +0.3 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.1 +0.5 N.D. -0.7
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.3 +0.4 N.D. +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 -0.0 N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.2 +0.2 N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.1 -0.3 +0.4 N.D. +0.3
growth on oleic acid YNB Glucose -0.2 -0.3 +0.5 N.D. +0.5
auxotrophy YNB Glucose -0.0 -0.3 +0.3 N.D. +0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 -0.0 +0.5 N.D. +0.8
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.3 +0.1 N.D. +0.3
growth on ypd YPD -0.2 -0.3 +0.7 N.D. +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.5 +1.1 N.D. +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.1 +0.7 N.D. +1.2
growth on ricinoleic acid YNB Glucose +0.1 -0.1 +0.2 N.D. +1.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.0 +0.6 N.D. +1.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.2 +0.4 N.D. +1.7
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.0 +0.2 N.D. +1.5
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