Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13621 and 13622 are separated by 716 nucleotides
13622 and 13623 are separated by 289 nucleotides
13623 and 13624 are separated by 1804 nucleotides
13624 and 13625 are separated by 1986 nucleotides
mRNA_5253: 13621 - Hypothetical Protein, at 278,991 to 279,822
13621
mRNA_5254: 13622 - HMMPfam-10 TM Acyl Transferase domain found in Cas1p-PF07779,HMMPfam-GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p-PF13839, at 280,539 to 283,748
13622
mRNA_5255: 13623 - K12604 CNOT1, NOT1 CCR4-NOT transcription complex subunit 1, at 284,038 to 290,339
13623
mRNA_5256: 13624 - SUPERFAMILY--SSF53448, at 292,144 to 293,863
13624
mRNA_5257: 13625 - K11887 PAAF1, RPN14 proteasomal ATPase-associated factor 1, at 295,850 to 297,525
13625
Group
Condition
mRNA
_5253
mRNA
_5254
mRNA
_5255
mRNA
_5256
mRNA
_5257
13621
13622
13623
13624
13625
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.6
N.D.
-0.5
-0.5
auxotrophy
Dropout Complete
-0.4
+0.0
N.D.
+0.0
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.2
N.D.
-0.3
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.5
N.D.
-0.7
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.3
N.D.
-0.1
-0.1
growth on oleic acid
YNB Oleic Acid
-0.3
+0.4
N.D.
+0.3
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.0
N.D.
+0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.4
N.D.
+0.3
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.2
N.D.
+0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.4
N.D.
+0.7
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
+1.1
N.D.
+0.4
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.7
N.D.
+1.2
-0.9
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.5
N.D.
+0.8
-0.5
growth on oleic acid
YNB Glucose
-0.3
+0.5
N.D.
+0.5
+0.1
auxotrophy
YNB Glucose
-0.3
+0.3
N.D.
+0.7
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.3
+0.1
N.D.
+0.3
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
+0.6
N.D.
+1.2
-0.3
growth on ricinoleic acid
YNB Glucose
-0.1
+0.2
N.D.
+1.0
+0.4
growth on ypd
YPD
-0.3
+0.7
N.D.
+0.5
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
+0.2
N.D.
+1.5
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.4
N.D.
+1.7
+0.3
remove
mRNA_5253
plot
remove
mRNA_5254
plot
remove
mRNA_5255
remove
mRNA_5256
plot
remove
mRNA_5257
plot