Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13626 and 13627 are separated by 419 nucleotides13627 and 13628 are separated by 756 nucleotides13628 and 13629 are separated by 580 nucleotides13629 and 13630 are separated by 836 nucleotides mRNA_5258: 13626 - KOG0538 Glycolate oxidase, at 297,725 to 299,742 13626 mRNA_5259: 13627 - K01424 E3.5.1.1, ansA, ansB L-asparaginase, at 300,162 to 301,995 13627 mRNA_5260: 13628 - K02263 COX4 cytochrome c oxidase subunit 4, at 302,752 to 303,807 13628 mRNA_5261: 13629 - K01173 ENDOG endonuclease G, mitochondrial, at 304,388 to 306,039 13629 mRNA_5262: 13630 - K00161 PDHA, pdhA pyruvate dehydrogenase E1 component alpha subunit, at 306,876 to 308,801 13630
Group Condition mRNA_5258 mRNA_5259 mRNA_5260 mRNA_5261 mRNA_5262
13626 13627 13628 13629 13630
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 -0.5 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.7 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.7 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.5 N.D. N.D. N.D.
auxotrophy Dropout Complete -0.3 -0.4 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.3 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.3 -0.5 N.D. N.D. N.D.
growth on ypd YPD -0.4 -0.3 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.5 N.D. N.D. N.D.
growth on oleic acid YNB Glucose -0.3 -0.3 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.1 N.D. N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.6 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.1 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.1 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.2 -0.4 N.D. N.D. N.D.
auxotrophy YNB Glucose +0.1 -0.3 N.D. N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.1 N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.2 N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -0.0 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.4 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.4 +0.4 N.D. N.D. N.D.
remove
mRNA_5258
plot		 remove
mRNA_5259
plot		 remove
mRNA_5260		 remove
mRNA_5261
plot		 remove
mRNA_5262
plot