Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13631 and 13632 are separated by 563 nucleotides
13632 and 13633 are separated by 454 nucleotides
13633 and 13634 are separated by 1489 nucleotides
13634 and 13635 are separated by 681 nucleotides
mRNA_5263: 13631 - BLAST pyruvate dehydrogenase E1 component subunit alpha [Mi..., at 309,267 to 309,581
13631
mRNA_5264: 13632 - Hypothetical Protein, at 310,145 to 311,167
13632
mRNA_5265: 13633 - K18749 LSM14, RAP55, SCD6 protein LSM14, at 311,622 to 313,606
13633
mRNA_5266: 13634 - K03262 EIF5 translation initiation factor 5, at 315,096 to 316,635
13634
mRNA_5267: 13635 - KOG2504 Monocarboxylate transporter, at 317,317 to 318,833
13635
Group
Condition
mRNA
_5263
mRNA
_5264
mRNA
_5265
mRNA
_5266
mRNA
_5267
13631
13632
13633
13634
13635
growth on ypd
YPD
-0.0
-0.5
-0.2
N.D.
-0.3
growth on oleic acid
YNB Glucose
-0.1
-0.2
-0.3
N.D.
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.5
+0.0
N.D.
+0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.5
+0.1
N.D.
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.3
+0.2
N.D.
-0.1
auxotrophy
YNB Glucose
+0.0
-0.3
+0.2
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.3
+0.1
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.1
+0.2
N.D.
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.3
+0.9
N.D.
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-0.3
-0.3
N.D.
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.1
+0.0
N.D.
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.4
-0.0
N.D.
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.1
+0.0
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
-0.1
-0.0
N.D.
-0.1
auxotrophy
Dropout Complete
+0.0
-0.2
+0.4
N.D.
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
+0.3
+0.4
N.D.
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.4
-0.2
N.D.
+0.2
growth on ricinoleic acid
YNB Glucose
-0.1
-0.2
+0.8
N.D.
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.1
+0.7
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.3
+0.3
N.D.
-0.1
growth on oleic acid
YNB Oleic Acid
-0.2
+0.2
+0.3
N.D.
+0.4
remove
mRNA_5263
plot
remove
mRNA_5264
plot
remove
mRNA_5265
remove
mRNA_5266
plot
remove
mRNA_5267
plot