Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13631 and 13632 are separated by 563 nucleotides13632 and 13633 are separated by 454 nucleotides13633 and 13634 are separated by 1489 nucleotides13634 and 13635 are separated by 681 nucleotides mRNA_5263: 13631 - BLAST pyruvate dehydrogenase E1 component subunit alpha [Mi..., at 309,267 to 309,581 13631 mRNA_5264: 13632 - Hypothetical Protein, at 310,145 to 311,167 13632 mRNA_5265: 13633 - K18749 LSM14, RAP55, SCD6 protein LSM14, at 311,622 to 313,606 13633 mRNA_5266: 13634 - K03262 EIF5 translation initiation factor 5, at 315,096 to 316,635 13634 mRNA_5267: 13635 - KOG2504 Monocarboxylate transporter, at 317,317 to 318,833 13635
Group Condition mRNA_5263 mRNA_5264 mRNA_5265 mRNA_5266 mRNA_5267
13631 13632 13633 13634 13635
growth on ypd YPD -0.0 -0.5 -0.2 N.D. -0.3
growth on oleic acid YNB Glucose -0.1 -0.2 -0.3 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.5 +0.0 N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.5 +0.1 N.D. -0.0
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.3 +0.2 N.D. -0.1
auxotrophy YNB Glucose +0.0 -0.3 +0.2 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.3 +0.1 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.1 +0.2 N.D. -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.3 +0.9 N.D. -0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.3 -0.3 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.1 +0.0 N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.4 -0.0 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.1 +0.0 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.1 -0.0 N.D. -0.1
auxotrophy Dropout Complete +0.0 -0.2 +0.4 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.3 +0.4 N.D. -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.4 -0.2 N.D. +0.2
growth on ricinoleic acid YNB Glucose -0.1 -0.2 +0.8 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 +0.7 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.3 +0.3 N.D. -0.1
growth on oleic acid YNB Oleic Acid -0.2 +0.2 +0.3 N.D. +0.4
remove
mRNA_5263
plot
remove
mRNA_5264
plot
remove
mRNA_5265
remove
mRNA_5266
plot
remove
mRNA_5267
plot