Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13636 and 13637 are separated by 605 nucleotides13637 and 13638 are separated by 1344 nucleotides13638 and 13639 are separated by 534 nucleotides13639 and 13640 are separated by 216 nucleotides mRNA_5268: 13636 - K10389 TUBG tubulin gamma, at 319,582 to 321,853 13636 mRNA_5269: 13637 - K03320 amt, AMT, MEP ammonium transporter, Amt family, at 322,459 to 324,944 13637 mRNA_5270: 13638 - Hypothetical Protein, at 326,289 to 326,690 13638 mRNA_5271: 13639 - K11841 USP10, UBP3 ubiquitin carboxyl-terminal hydrolase 10, at 327,225 to 330,329 13639 mRNA_5272: 13640 - K02731 PSMA7 20S proteasome subunit alpha 4, at 330,546 to 332,091 13640
Group Condition mRNA_5268 mRNA_5269 mRNA_5270 mRNA_5271 mRNA_5272
13636 13637 13638 13639 13640
growth on oleic acid YNB Glucose N.D. -0.3 -0.5 -1.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.4 -0.5 -0.6 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.0 -0.5 -0.9 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 -0.6 -0.5 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.4 -0.1 -0.6 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 +0.2 -1.1 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. -0.4 +0.1 -0.8 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 +0.1 -0.8 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 -0.2 -0.6 N.D.
auxotrophy Dropout Complete N.D. +0.2 -0.2 -0.8 N.D.
growth on ricinoleic acid YNB Glucose N.D. -0.2 -0.2 -0.3 N.D.
auxotrophy YNB Glucose N.D. -0.2 +0.1 -0.5 N.D.
growth on oleic acid YNB Oleic Acid N.D. +0.3 -0.4 -0.6 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.0 -0.0 -0.6 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.3 +0.0 -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 +0.1 -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.2 +0.2 -0.0 N.D.
growth on ypd YPD N.D. +0.1 -0.4 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.0 +0.2 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 -0.1 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 +0.2 +0.2 N.D.
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