Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13638 and 13639 are separated by 534 nucleotides13639 and 13640 are separated by 216 nucleotides13640 and 13641 are separated by 438 nucleotides13641 and 13642 are separated by 346 nucleotides mRNA_5270: 13638 - Hypothetical Protein, at 326,289 to 326,690 13638 mRNA_5271: 13639 - K11841 USP10, UBP3 ubiquitin carboxyl-terminal hydrolase 10, at 327,225 to 330,329 13639 mRNA_5272: 13640 - K02731 PSMA7 20S proteasome subunit alpha 4, at 330,546 to 332,091 13640 mRNA_5273: 13641 - K00004 BDH, butB (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase, at 332,530 to 334,206 13641 mRNA_5274: 13642 - KOG0032 Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily, at 334,553 to 337,184 13642
Group Condition mRNA_5270 mRNA_5271 mRNA_5272 mRNA_5273 mRNA_5274
13638 13639 13640 13641 13642
growth on oleic acid YNB Glucose -0.5 -1.1 N.D. +0.2 -1.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.9 N.D. +0.1 -1.0
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.8 N.D. -0.2 -1.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.6 N.D. +0.1 -1.5
auxotrophy Dropout Complete -0.2 -0.8 N.D. -0.1 -1.0
growth on oleic acid YNB Oleic Acid -0.4 -0.6 N.D. +0.0 -1.0
growth on ricinoleic acid YNB Glucose -0.2 -0.3 N.D. -0.2 -1.2
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.8 N.D. +0.0 -1.0
auxotrophy YNB Glucose +0.1 -0.5 N.D. -0.3 -0.7
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -1.1 N.D. -0.0 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.5 N.D. +0.0 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.6 N.D. -0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.6 N.D. -0.0 -0.3
growth on ypd YPD -0.4 +0.3 N.D. -0.3 -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.2 N.D. -0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.0 N.D. +0.0 -0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.2 N.D. -0.2 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.6 N.D. -0.4 +1.5
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.3 N.D. +0.2 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.0 N.D. +0.3 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.2 N.D. +0.3 +0.3
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