Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13639 and 13640 are separated by 216 nucleotides13640 and 13641 are separated by 438 nucleotides13641 and 13642 are separated by 346 nucleotides13642 and 13643 are separated by 334 nucleotides mRNA_5271: 13639 - K11841 USP10, UBP3 ubiquitin carboxyl-terminal hydrolase 10, at 327,225 to 330,329 13639 mRNA_5272: 13640 - K02731 PSMA7 20S proteasome subunit alpha 4, at 330,546 to 332,091 13640 mRNA_5273: 13641 - K00004 BDH, butB (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase, at 332,530 to 334,206 13641 mRNA_5274: 13642 - KOG0032 Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily, at 334,553 to 337,184 13642 mRNA_5275: 13643 - K06688 UBE2C, UBC11 ubiquitin-conjugating enzyme E2 C, at 337,519 to 338,338 13643
Group Condition mRNA_5271 mRNA_5272 mRNA_5273 mRNA_5274 mRNA_5275
13639 13640 13641 13642 13643
growth on oleic acid YNB Glucose -1.1 N.D. +0.2 -1.2 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.8 N.D. -0.2 -1.3 -0.0
growth on oleic acid YNB Oleic Acid -0.6 N.D. +0.0 -1.0 -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 N.D. -0.1 -0.3 -1.0
auxotrophy Dropout Complete -0.8 N.D. -0.1 -1.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 N.D. +0.1 -1.5 +0.3
auxotrophy YNB Glucose 75mM Methionine -0.8 N.D. +0.0 -1.0 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -1.1 N.D. -0.0 -0.4 +0.0
auxotrophy YNB Glucose -0.5 N.D. -0.3 -0.7 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 N.D. +0.0 -0.3 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. -0.2 -0.2 -0.6
growth on ricinoleic acid YNB Glucose -0.3 N.D. -0.2 -1.2 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. +0.0 -0.7 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 N.D. +0.1 -1.0 +0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. -0.2 -0.3 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 N.D. -0.0 -0.3 +0.4
ypd buoyancy 40 hrs Low Buoyancy -0.3 N.D. +0.2 +0.0 -0.1
growth on ypd YPD +0.3 N.D. -0.3 -0.3 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 N.D. -0.4 +1.5 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. +0.3 +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. +0.3 +0.3 -0.0
remove
mRNA_5271
plot
remove
mRNA_5272
plot
remove
mRNA_5273
remove
mRNA_5274
plot
remove
mRNA_5275
plot