Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13641 and 13642 are separated by 346 nucleotides
13642 and 13643 are separated by 334 nucleotides
13643 and 13644 are separated by 920 nucleotides
13644 and 13645 are separated by 156 nucleotides
mRNA_5273: 13641 - K00004 BDH, butB (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase, at 332,530 to 334,206
13641
mRNA_5274: 13642 - KOG0032 Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily, at 334,553 to 337,184
13642
mRNA_5275: 13643 - K06688 UBE2C, UBC11 ubiquitin-conjugating enzyme E2 C, at 337,519 to 338,338
13643
mRNA_5276: 13644 - Hypothetical Protein, at 339,259 to 340,241
13644
mRNA_5277: 13645 - Hypothetical Protein, at 340,398 to 341,217
13645
Group
Condition
mRNA
_5273
mRNA
_5274
mRNA
_5275
mRNA
_5276
mRNA
_5277
13641
13642
13643
13644
13645
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.3
-1.0
-0.0
-0.5
growth on oleic acid
YNB Oleic Acid
+0.0
-1.0
-0.7
+0.0
-0.2
growth on oleic acid
YNB Glucose
+0.2
-1.2
-0.4
-0.3
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-1.3
-0.0
-0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-1.5
+0.3
-0.2
-0.0
auxotrophy
YNB Glucose
-0.3
-0.7
+0.0
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-0.7
-0.3
+0.3
-0.6
auxotrophy
Dropout Complete
-0.1
-1.0
-0.1
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-1.0
+0.3
-0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.4
+0.0
-0.3
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.3
-0.4
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
-0.3
-0.6
+0.1
-0.1
growth on ricinoleic acid
YNB Glucose
-0.2
-1.2
+0.6
-0.1
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.2
-0.6
+0.1
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.3
+0.4
+0.0
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.0
-0.1
-0.1
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-1.0
+0.9
+0.2
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.3
+0.1
-0.1
-0.1
+0.1
growth on ypd
YPD
-0.3
-0.3
+0.1
+0.4
+0.4
ypd buoyancy
40 hrs High Buoyancy
+0.3
+0.3
-0.0
-0.1
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
+1.5
-0.5
+0.4
-0.0
remove
mRNA_5273
plot
remove
mRNA_5274
plot
remove
mRNA_5275
remove
mRNA_5276
plot
remove
mRNA_5277
plot