Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13645 and 13646 are separated by 274 nucleotides13646 and 13647 are separated by 411 nucleotides13647 and 13648 are separated by 886 nucleotides13648 and 13649 are separated by 771 nucleotides mRNA_5277: 13645 - Hypothetical Protein, at 340,398 to 341,217 13645 mRNA_5278: 13646 - KOG1488 Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily), at 341,492 to 344,533 13646 mRNA_5279: 13647 - KOG2231 Predicted E3 ubiquitin ligase, at 344,945 to 347,664 13647 mRNA_5280: 13648 - KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily, at 348,551 to 349,893 13648 mRNA_5281: 13649 - KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily, at 350,665 to 352,490 13649
Group Condition mRNA_5277 mRNA_5278 mRNA_5279 mRNA_5280 mRNA_5281
13645 13646 13647 13648 13649
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.6 -0.2 -0.4 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.4 -0.6 -0.1 +0.0
growth on oleic acid YNB Oleic Acid -0.2 -0.3 -0.4 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.4 -0.1 -0.2 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 +0.1 -0.2 -0.5 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.4 -0.7 +0.4 -0.2
auxotrophy YNB Glucose -0.1 -0.4 -0.0 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.4 -0.3 -0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.1 -0.2 -0.1 -0.2
auxotrophy Dropout Complete -0.1 -0.4 +0.1 -0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.3 -0.1 -0.3 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.3 -0.1 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 -0.0 +0.1 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.2 -0.0 +0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.3 +0.0 +0.2 +0.0
growth on ricinoleic acid YNB Glucose +0.1 -0.3 -0.2 +0.3 +0.0
growth on oleic acid YNB Glucose +0.0 -0.2 -0.0 +0.3 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.1 -0.1 -0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 +0.1 -0.2 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.1 -0.1 -0.3 +0.7
growth on ypd YPD +0.4 -0.5 -0.2 +1.1 +0.0
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