Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13645 and 13646 are separated by 274 nucleotides
13646 and 13647 are separated by 411 nucleotides
13647 and 13648 are separated by 886 nucleotides
13648 and 13649 are separated by 771 nucleotides
mRNA_5277: 13645 - Hypothetical Protein, at 340,398 to 341,217
13645
mRNA_5278: 13646 - KOG1488 Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily), at 341,492 to 344,533
13646
mRNA_5279: 13647 - KOG2231 Predicted E3 ubiquitin ligase, at 344,945 to 347,664
13647
mRNA_5280: 13648 - KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily, at 348,551 to 349,893
13648
mRNA_5281: 13649 - KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily, at 350,665 to 352,490
13649
Group
Condition
mRNA
_5277
mRNA
_5278
mRNA
_5279
mRNA
_5280
mRNA
_5281
13645
13646
13647
13648
13649
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.6
-0.2
-0.4
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
-0.4
-0.6
-0.1
+0.0
growth on oleic acid
YNB Oleic Acid
-0.2
-0.3
-0.4
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
-0.4
-0.1
-0.2
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
+0.1
-0.2
-0.5
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.4
-0.7
+0.4
-0.2
auxotrophy
YNB Glucose
-0.1
-0.4
-0.0
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.4
-0.3
-0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.1
-0.2
-0.1
-0.2
auxotrophy
Dropout Complete
-0.1
-0.4
+0.1
-0.1
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
+0.3
-0.1
-0.3
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
+0.3
-0.1
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.1
-0.0
+0.1
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.2
-0.0
+0.0
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.3
+0.0
+0.2
+0.0
growth on ricinoleic acid
YNB Glucose
+0.1
-0.3
-0.2
+0.3
+0.0
growth on oleic acid
YNB Glucose
+0.0
-0.2
-0.0
+0.3
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.1
-0.1
-0.1
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.1
+0.1
-0.2
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.1
-0.1
-0.3
+0.7
growth on ypd
YPD
+0.4
-0.5
-0.2
+1.1
+0.0
remove
mRNA_5277
plot
remove
mRNA_5278
plot
remove
mRNA_5279
remove
mRNA_5280
plot
remove
mRNA_5281
plot