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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13651 and 13652 are separated by 1477 nucleotides
13652 and 13653 are separated by 718 nucleotides
13653 and 13654 are separated by 286 nucleotides
13654 and 13655 are separated by 479 nucleotides
mRNA_5283: 13651 - Hypothetical Protein, at 353,756 to 354,946
13651
mRNA_5284: 13652 - Hypothetical Protein, at 356,424 to 357,463
13652
mRNA_5285: 13653 - HMMPfam-FAD binding domain-PF01494,PRINTS-Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature-PR00420,SUPERFAMILY--SSF51905, at 358,182 to 359,480
13653
mRNA_5286: 13654 - Hypothetical Protein, at 359,767 to 360,966
13654
mRNA_5287: 13655 - KOG0835 Cyclin L, at 361,446 to 362,639
13655
Group
Condition
mRNA
_5283
mRNA
_5284
mRNA
_5285
mRNA
_5286
mRNA
_5287
13651
13652
13653
13654
13655
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.2
-1.1
-0.5
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-1.5
+1.1
-0.5
-0.5
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.3
-0.7
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.8
-0.3
-0.0
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.2
-0.3
-0.2
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.5
-0.2
-0.4
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.1
-0.5
-0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.3
-0.2
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-0.5
-0.3
+0.0
N.D.
growth on oleic acid
YNB Oleic Acid
+0.2
-0.3
-0.4
-0.1
N.D.
growth on ricinoleic acid
YNB Glucose
-0.0
+0.1
-0.6
-0.0
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.1
-0.3
-0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.3
-0.0
-0.2
N.D.
auxotrophy
Dropout Complete
+0.0
+0.3
-0.4
-0.3
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.0
+0.0
+0.0
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.5
+0.2
-0.5
-0.3
N.D.
auxotrophy
YNB Glucose
+0.2
+0.3
-0.5
-0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.2
+0.2
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.2
+0.2
+0.3
N.D.
growth on oleic acid
YNB Glucose
+0.3
+0.5
-0.3
+0.3
N.D.
growth on ypd
YPD
+0.7
+0.5
+0.6
-0.3
N.D.
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