Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13654 and 13655 are separated by 479 nucleotides13655 and 13656 are separated by 303 nucleotides13656 and 13657 are separated by 103 nucleotides13657 and 13658 are separated by 421 nucleotides mRNA_5286: 13654 - Hypothetical Protein, at 359,767 to 360,966 13654 mRNA_5287: 13655 - KOG0835 Cyclin L, at 361,446 to 362,639 13655 mRNA_5288: 13656 - HMMPfam-Complex I intermediate-associated protein 30 (CIA30)-PF08547,SUPERFAMILY--SSF49785, at 362,943 to 363,833 13656 mRNA_5289: 13657 - K00344 qor, CRYZ NADPH2-quinone reductase, at 363,937 to 365,504 13657 mRNA_5290: 13658 - HMMPfam-ARID/BRIGHT DNA binding domain-PF01388,ProSiteProfiles-ARID domain profile.-PS51011,SMART-BRIGHT, ARID (A/T-rich interaction domain) domain-SM00501,SMART-ARID/BRIGHT DNA binding domain-SM01014,SUPERFAMILY--SSF46774, at 365,926 to 369,880 13658
Group Condition mRNA_5286 mRNA_5287 mRNA_5288 mRNA_5289 mRNA_5290
13654 13655 13656 13657 13658
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 N.D. -0.2 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 N.D. -0.2 -0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 N.D. +0.1 -0.2 +0.0
growth on ricinoleic acid YNB Glucose -0.0 N.D. +0.0 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. -0.0 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. -0.3 -0.1 -0.0
growth on oleic acid YNB Oleic Acid -0.1 N.D. +0.1 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. -0.2 +0.3 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. -0.0 -0.3 +0.2
growth on ypd YPD -0.3 N.D. +0.2 +0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. +0.1 +0.3 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 N.D. +0.8 +0.2 -0.1
auxotrophy Dropout Complete -0.3 N.D. +0.4 +0.4 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 N.D. +0.3 +0.5 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. +0.5 +0.1 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. +0.1 -0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. +0.4 +0.1 +0.1
auxotrophy YNB Glucose -0.1 N.D. +0.3 +0.4 -0.0
growth on oleic acid YNB Glucose +0.3 N.D. +0.3 +0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 N.D. +0.4 +0.3 +0.4
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. +0.5 +0.7 -0.0
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