Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13656 and 13657 are separated by 103 nucleotides13657 and 13658 are separated by 421 nucleotides13658 and 13659 are separated by 397 nucleotides13659 and 13660 are separated by 624 nucleotides mRNA_5288: 13656 - HMMPfam-Complex I intermediate-associated protein 30 (CIA30)-PF08547,SUPERFAMILY--SSF49785, at 362,943 to 363,833 13656 mRNA_5289: 13657 - K00344 qor, CRYZ NADPH2-quinone reductase, at 363,937 to 365,504 13657 mRNA_5290: 13658 - HMMPfam-ARID/BRIGHT DNA binding domain-PF01388,ProSiteProfiles-ARID domain profile.-PS51011,SMART-BRIGHT, ARID (A/T-rich interaction domain) domain-SM00501,SMART-ARID/BRIGHT DNA binding domain-SM01014,SUPERFAMILY--SSF46774, at 365,926 to 369,880 13658 mRNA_5291: 13659 - K00799 GST, gst glutathione S-transferase, at 370,278 to 371,436 13659 mRNA_5292: 13660 - Hypothetical Protein, at 372,061 to 373,005 13660
Group Condition mRNA_5288 mRNA_5289 mRNA_5290 mRNA_5291 mRNA_5292
13656 13657 13658 13659 13660
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.2 -0.2 +0.1 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.3 +0.0 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.1 -0.0 +0.3 +0.0
growth on ricinoleic acid YNB Glucose +0.0 -0.2 -0.1 -0.1 +0.2
growth on ypd YPD +0.2 +0.2 +0.1 -0.2 -0.3
growth on oleic acid YNB Oleic Acid +0.1 -0.1 -0.1 +0.0 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 +0.2 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.2 -0.1 +0.6 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.2 +0.0 +0.0 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.4 +0.1 +0.1 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.3 +0.3 +0.3 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.5 +0.1 +0.0 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.3 +0.2 +0.3 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +0.3 +0.4 -0.3 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.3 +0.2 +0.2 -0.2
auxotrophy Dropout Complete +0.4 +0.4 -0.1 +0.1 -0.1
growth on oleic acid YNB Glucose +0.3 +0.1 -0.1 +0.1 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.8 +0.2 -0.1 -0.3 +0.1
auxotrophy YNB Glucose +0.3 +0.4 -0.0 +0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.5 -0.1 +0.4 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.5 +0.7 -0.0 +0.0 -0.0
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