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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13662 and 13663 are separated by 504 nucleotides
13663 and 13664 are separated by 484 nucleotides
13664 and 13665 are separated by 305 nucleotides
13665 and 13666 are separated by 2322 nucleotides
mRNA_5294: 13662 - K02830 HRAD1, RAD17 cell cycle checkpoint protein, at 378,624 to 380,568
13662
mRNA_5295: 13663 - Hypothetical Protein, at 381,073 to 381,951
13663
mRNA_5296: 13664 - Hypothetical Protein, at 382,436 to 382,844
13664
mRNA_5297: 13665 - Hypothetical Protein, at 383,150 to 384,089
13665
mRNA_5298: 13666 - KOG0758 Mitochondrial carnitine-acylcarnitine carrier protein, at 386,412 to 388,025
13666
Group
Condition
mRNA
_5294
mRNA
_5295
mRNA
_5296
mRNA
_5297
mRNA
_5298
13662
13663
13664
13665
13666
facs on lipid accumulation
Sorted Low BODIPY Gate
-4.3
-0.0
-0.2
-0.0
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-1.8
-0.2
-0.2
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-2.1
+0.1
+0.1
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-1.3
-0.3
+0.2
-0.3
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-1.2
-0.1
-0.3
+0.0
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.0
-0.3
-0.3
+0.0
N.D.
growth on ricinoleic acid
YNB Glucose
-0.9
-0.4
-0.2
+0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.7
-0.5
+0.0
-0.0
N.D.
auxotrophy
YNB Glucose
-0.8
-0.6
+0.3
-0.0
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.1
-0.2
+0.3
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.8
-0.0
+0.0
+0.1
N.D.
growth on oleic acid
YNB Oleic Acid
-0.6
+0.3
-0.2
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.0
-0.3
+0.1
N.D.
growth on oleic acid
YNB Glucose
-0.6
-0.0
+0.2
-0.1
N.D.
auxotrophy
Dropout Complete
-0.5
-0.4
+0.3
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
+0.1
+0.1
-0.1
N.D.
growth on ypd
YPD
-0.4
-0.3
+0.5
+0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.2
-0.0
+0.2
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
-0.2
+0.1
+0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.1
+0.2
+0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.6
+0.1
+0.0
+0.3
N.D.
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