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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13663 and 13664 are separated by 484 nucleotides
13664 and 13665 are separated by 305 nucleotides
13665 and 13666 are separated by 2322 nucleotides
13666 and 13667 are separated by 335 nucleotides
mRNA_5295: 13663 - Hypothetical Protein, at 381,073 to 381,951
13663
mRNA_5296: 13664 - Hypothetical Protein, at 382,436 to 382,844
13664
mRNA_5297: 13665 - Hypothetical Protein, at 383,150 to 384,089
13665
mRNA_5298: 13666 - KOG0758 Mitochondrial carnitine-acylcarnitine carrier protein, at 386,412 to 388,025
13666
mRNA_5299: 13667 - BLAST RNA polymerase sigma factor, sigma-70 family [Rho..., at 388,361 to 391,277
13667
Group
Condition
mRNA
_5295
mRNA
_5296
mRNA
_5297
mRNA
_5298
mRNA
_5299
13663
13664
13665
13666
13667
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.3
+0.0
N.D.
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.2
-0.3
N.D.
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.5
+0.0
-0.0
N.D.
-0.1
auxotrophy
YNB Glucose
-0.6
+0.3
-0.0
N.D.
-0.3
growth on ricinoleic acid
YNB Glucose
-0.4
-0.2
+0.2
N.D.
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.2
-0.0
N.D.
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.2
+0.3
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.3
+0.1
N.D.
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.3
+0.0
N.D.
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.0
+0.2
N.D.
-0.5
auxotrophy
Dropout Complete
-0.4
+0.3
+0.1
N.D.
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.3
+0.1
N.D.
-0.3
growth on oleic acid
YNB Glucose
-0.0
+0.2
-0.1
N.D.
+0.1
growth on ypd
YPD
-0.3
+0.5
+0.1
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.1
+0.1
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.0
+0.1
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.1
-0.1
N.D.
+0.2
growth on oleic acid
YNB Oleic Acid
+0.3
-0.2
-0.1
N.D.
+0.4
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.0
+0.3
N.D.
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
+0.1
+0.1
N.D.
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.2
+0.2
N.D.
+0.1
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