Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13666 and 13667 are separated by 335 nucleotides13667 and 13668 are separated by 550 nucleotides13668 and 13669 are separated by 190 nucleotides13669 and 13670 are separated by 558 nucleotides mRNA_5298: 13666 - KOG0758 Mitochondrial carnitine-acylcarnitine carrier protein, at 386,412 to 388,025 13666 mRNA_5299: 13667 - BLAST RNA polymerase sigma factor, sigma-70 family [Rho..., at 388,361 to 391,277 13667 mRNA_5300: 13668 - K03023 RPC3, POLR3C DNA-directed RNA polymerase III subunit RPC3, at 391,828 to 394,452 13668 mRNA_5301: 13669 - K13950 pabAB para-aminobenzoate synthetase, at 394,643 to 397,418 13669 mRNA_5302: 13670 - K08711 ABCG2.PDR, CDR1 ATP-binding cassette, subfamily G (WHITE), member 2, PDR, at 397,977 to 403,896 13670
Group Condition mRNA_5298 mRNA_5299 mRNA_5300 mRNA_5301 mRNA_5302
13666 13667 13668 13669 13670
ypd buoyancy 40 hrs High Buoyancy N.D. -0.5 N.D. -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. -0.3 N.D. -0.2 -0.1
auxotrophy YNB Glucose N.D. -0.3 N.D. +0.0 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.3 N.D. -0.2 +0.0
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 N.D. -0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.2 N.D. -0.1 -0.0
growth on ypd YPD N.D. -0.1 N.D. -0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 N.D. -0.2 -0.1
growth on ricinoleic acid YNB Glucose N.D. -0.2 N.D. +0.0 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.3 N.D. -0.1 -0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 N.D. -0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.0 N.D. -0.0 -0.1
auxotrophy Dropout Complete N.D. -0.1 N.D. +0.0 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.0 N.D. -0.1 +0.1
growth on oleic acid YNB Glucose N.D. +0.1 N.D. +0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 N.D. +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.0 N.D. +0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 N.D. +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 N.D. +0.1 +0.1
growth on oleic acid YNB Oleic Acid N.D. +0.4 N.D. +0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 N.D. +0.2 -0.1
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