Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13668 and 13669 are separated by 190 nucleotides13669 and 13670 are separated by 558 nucleotides13670 and 13671 are separated by 1293 nucleotides13671 and 13672 are separated by 286 nucleotides mRNA_5300: 13668 - K03023 RPC3, POLR3C DNA-directed RNA polymerase III subunit RPC3, at 391,828 to 394,452 13668 mRNA_5301: 13669 - K13950 pabAB para-aminobenzoate synthetase, at 394,643 to 397,418 13669 mRNA_5302: 13670 - K08711 ABCG2.PDR, CDR1 ATP-binding cassette, subfamily G (WHITE), member 2, PDR, at 397,977 to 403,896 13670 mRNA_5303: 13671 - K17608 STRN1_3_4 striatin 1/3/4, at 405,190 to 408,801 13671 mRNA_5304: 13672 - KOG3598 Thyroid hormone receptor-associated protein complex, subunit TRAP230, at 409,088 to 413,869 13672
Group Condition mRNA_5300 mRNA_5301 mRNA_5302 mRNA_5303 mRNA_5304
13668 13669 13670 13671 13672
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 -0.4 -0.5 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 +0.1 -0.5 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.0 -0.1 -0.4 +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 -0.1 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 -0.1 -0.3 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 +0.1 -0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.2 -0.1 +0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 +0.1 -0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 -0.1 -0.2 +0.3
growth on ypd YPD N.D. -0.2 -0.1 +0.2 +0.4
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 -0.2 +0.5 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 +0.1 +0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 -0.1 +0.5 +0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 +0.2 +0.2 +0.2
growth on oleic acid YNB Glucose N.D. +0.0 -0.1 +0.4 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 +0.0 +0.8 -0.1
auxotrophy YNB Glucose N.D. +0.0 -0.2 +0.7 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 -0.0 +0.7 +0.2
growth on ricinoleic acid YNB Glucose N.D. +0.0 +0.1 +0.5 +0.3
growth on oleic acid YNB Oleic Acid N.D. +0.1 -0.1 +0.7 +0.2
auxotrophy Dropout Complete N.D. +0.0 +0.0 +0.7 +0.2
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