Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13671 and 13672 are separated by 286 nucleotides
13672 and 13673 are separated by 479 nucleotides
13673 and 13674 are separated by 267 nucleotides
13674 and 13675 are separated by 158 nucleotides
mRNA_5303: 13671 - K17608 STRN1_3_4 striatin 1/3/4, at 405,190 to 408,801
13671
mRNA_5304: 13672 - KOG3598 Thyroid hormone receptor-associated protein complex, subunit TRAP230, at 409,088 to 413,869
13672
mRNA_5305: 13673 - K14859 SSF1_2 ribosome biogenesis protein SSF1/2, at 414,349 to 416,763
13673
mRNA_5306: 13674 - BLAST PQ-loop repeat protein [Colletotrichum tofieldiae], at 417,031 to 419,663
13674
mRNA_5307: 13675 - KOG3769 Ribonuclease III domain proteins, at 419,822 to 421,852
13675
Group
Condition
mRNA
_5303
mRNA
_5304
mRNA
_5305
mRNA
_5306
mRNA
_5307
13671
13672
13673
13674
13675
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.3
-1.1
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
-0.3
-0.6
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
-0.1
-0.6
-0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
+0.2
-0.3
+0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.1
+0.0
-0.4
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.0
-0.0
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.0
-0.0
+0.1
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.3
-0.1
-0.2
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.1
-0.1
-0.1
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.2
-0.4
+0.1
N.D.
growth on oleic acid
YNB Glucose
+0.4
+0.2
-0.1
-0.4
N.D.
growth on ricinoleic acid
YNB Glucose
+0.5
+0.3
-0.3
-0.2
N.D.
growth on oleic acid
YNB Oleic Acid
+0.7
+0.2
-0.3
-0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.1
+0.9
+0.3
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.8
-0.1
-0.2
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.5
+0.1
+0.0
+0.1
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.7
+0.2
-0.1
-0.0
N.D.
auxotrophy
Dropout Complete
+0.7
+0.2
-0.5
+0.3
N.D.
auxotrophy
YNB Glucose
+0.7
+0.1
-0.2
+0.2
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.5
+0.2
+0.3
+0.2
N.D.
growth on ypd
YPD
+0.2
+0.4
+1.1
-0.0
N.D.
remove
mRNA_5303
plot
remove
mRNA_5304
plot
remove
mRNA_5305
remove
mRNA_5306
plot
remove
mRNA_5307
plot