Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13672 and 13673 are separated by 479 nucleotides13673 and 13674 are separated by 267 nucleotides13674 and 13675 are separated by 158 nucleotides13675 and 13676 are separated by 116 nucleotides mRNA_5304: 13672 - KOG3598 Thyroid hormone receptor-associated protein complex, subunit TRAP230, at 409,088 to 413,869 13672 mRNA_5305: 13673 - K14859 SSF1_2 ribosome biogenesis protein SSF1/2, at 414,349 to 416,763 13673 mRNA_5306: 13674 - BLAST PQ-loop repeat protein [Colletotrichum tofieldiae], at 417,031 to 419,663 13674 mRNA_5307: 13675 - KOG3769 Ribonuclease III domain proteins, at 419,822 to 421,852 13675 mRNA_5308: 13676 - Hypothetical Protein, at 421,969 to 422,926 13676
Group Condition mRNA_5304 mRNA_5305 mRNA_5306 mRNA_5307 mRNA_5308
13672 13673 13674 13675 13676
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -1.1 -0.0 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.6 -0.1 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.2 +0.1 N.D. -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.1 -0.0 N.D. -0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.6 -0.0 N.D. +0.2
growth on ricinoleic acid YNB Glucose +0.3 -0.3 -0.2 N.D. -0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.4 +0.1 N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.3 +0.1 N.D. -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.0 -0.2 N.D. -0.2
growth on oleic acid YNB Oleic Acid +0.2 -0.3 -0.1 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.0 -0.4 N.D. -0.0
growth on oleic acid YNB Glucose +0.2 -0.1 -0.4 N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.1 -0.2 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.0 +0.1 N.D. -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 -0.1 N.D. +0.0
auxotrophy Dropout Complete +0.2 -0.5 +0.3 N.D. -0.1
auxotrophy YNB Glucose +0.1 -0.2 +0.2 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.0 +0.1 N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.3 +0.2 N.D. -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.9 +0.3 N.D. -0.1
growth on ypd YPD +0.4 +1.1 -0.0 N.D. +0.1
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