Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13673 and 13674 are separated by 267 nucleotides13674 and 13675 are separated by 158 nucleotides13675 and 13676 are separated by 116 nucleotides13676 and 13677 are separated by 222 nucleotides mRNA_5305: 13673 - K14859 SSF1_2 ribosome biogenesis protein SSF1/2, at 414,349 to 416,763 13673 mRNA_5306: 13674 - BLAST PQ-loop repeat protein [Colletotrichum tofieldiae], at 417,031 to 419,663 13674 mRNA_5307: 13675 - KOG3769 Ribonuclease III domain proteins, at 419,822 to 421,852 13675 mRNA_5308: 13676 - Hypothetical Protein, at 421,969 to 422,926 13676 mRNA_5309: 13677 - KOG0628 Aromatic-L-amino-acid/L-histidine decarboxylase, at 423,149 to 425,154 13677
Group Condition mRNA_5305 mRNA_5306 mRNA_5307 mRNA_5308 mRNA_5309
13673 13674 13675 13676 13677
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.1 -0.0 N.D. +0.1 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.1 N.D. -0.3 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.1 N.D. -0.1 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.0 N.D. -0.8 -0.2
growth on ricinoleic acid YNB Glucose -0.3 -0.2 N.D. -0.5 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.1 N.D. -0.4 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 -0.0 N.D. +0.2 -0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.2 N.D. -0.2 -0.4
auxotrophy YNB Glucose -0.2 +0.2 N.D. -0.2 -0.7
growth on oleic acid YNB Oleic Acid -0.3 -0.1 N.D. -0.2 -0.3
auxotrophy Dropout Complete -0.5 +0.3 N.D. -0.1 -0.5
growth on oleic acid YNB Glucose -0.1 -0.4 N.D. -0.0 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.1 N.D. -0.6 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.1 N.D. -0.3 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.1 N.D. +0.1 -0.7
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.2 N.D. -0.4 -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.2 N.D. -0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.4 N.D. -0.0 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 N.D. +0.0 +0.0
growth on ypd YPD +1.1 -0.0 N.D. +0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.9 +0.3 N.D. -0.1 +0.8
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