Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13674 and 13675 are separated by 158 nucleotides13675 and 13676 are separated by 116 nucleotides13676 and 13677 are separated by 222 nucleotides13677 and 13678 are separated by 410 nucleotides mRNA_5306: 13674 - BLAST PQ-loop repeat protein [Colletotrichum tofieldiae], at 417,031 to 419,663 13674 mRNA_5307: 13675 - KOG3769 Ribonuclease III domain proteins, at 419,822 to 421,852 13675 mRNA_5308: 13676 - Hypothetical Protein, at 421,969 to 422,926 13676 mRNA_5309: 13677 - KOG0628 Aromatic-L-amino-acid/L-histidine decarboxylase, at 423,149 to 425,154 13677 mRNA_5310: 13678 - Hypothetical Protein, at 425,565 to 427,309 13678
Group Condition mRNA_5306 mRNA_5307 mRNA_5308 mRNA_5309 mRNA_5310
13674 13675 13676 13677 13678
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 N.D. -0.8 -0.2 -0.1
growth on ricinoleic acid YNB Glucose -0.2 N.D. -0.5 -0.1 +0.0
auxotrophy YNB Glucose +0.2 N.D. -0.2 -0.7 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. -0.6 +0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. -0.3 -0.5 +0.1
growth on oleic acid YNB Oleic Acid -0.1 N.D. -0.2 -0.3 -0.1
growth on oleic acid YNB Glucose -0.4 N.D. -0.0 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. +0.1 -0.7 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. -0.1 -0.4 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. -0.3 -0.7 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. -0.4 -0.3 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. -0.4 -0.6 +0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. -0.2 -0.4 +0.6
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. -0.2 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. +0.1 -0.5 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. +0.2 -0.5 +0.2
growth on ypd YPD -0.0 N.D. +0.1 -0.3 +0.3
auxotrophy Dropout Complete +0.3 N.D. -0.1 -0.5 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.0 +0.0 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.4 N.D. -0.0 +0.2 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 N.D. -0.1 +0.8 +0.2
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