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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13676 and 13677 are separated by 222 nucleotides
13677 and 13678 are separated by 410 nucleotides
13678 and 13679 are separated by 303 nucleotides
13679 and 13680 are separated by 484 nucleotides
mRNA_5308: 13676 - Hypothetical Protein, at 421,969 to 422,926
13676
mRNA_5309: 13677 - KOG0628 Aromatic-L-amino-acid/L-histidine decarboxylase, at 423,149 to 425,154
13677
mRNA_5310: 13678 - Hypothetical Protein, at 425,565 to 427,309
13678
mRNA_5311: 13679 - Hypothetical Protein, at 427,613 to 428,578
13679
mRNA_5312: 13680 - K18182 COX16 cytochrome c oxidase assembly protein subunit 16, at 429,063 to 429,953
13680
Group
Condition
mRNA
_5308
mRNA
_5309
mRNA
_5310
mRNA
_5311
mRNA
_5312
13676
13677
13678
13679
13680
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.8
-0.2
-0.1
+0.0
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
+0.0
-0.2
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.7
-0.0
-0.1
N.D.
auxotrophy
YNB Glucose
-0.2
-0.7
+0.0
+0.2
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.3
+0.3
-0.3
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.5
+0.1
+0.2
N.D.
growth on ricinoleic acid
YNB Glucose
-0.5
-0.1
+0.0
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.4
+0.1
+0.0
N.D.
growth on oleic acid
YNB Oleic Acid
-0.2
-0.3
-0.1
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.5
+0.2
-0.1
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.7
+0.4
+0.3
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-0.6
+0.4
+0.3
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.4
+0.6
-0.2
N.D.
growth on oleic acid
YNB Glucose
-0.0
-0.4
+0.1
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
-0.5
+0.2
-0.0
N.D.
auxotrophy
Dropout Complete
-0.1
-0.5
+0.3
+0.2
N.D.
growth on ypd
YPD
+0.1
-0.3
+0.3
-0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.0
+0.1
+0.0
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.0
+0.1
+0.2
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.2
+0.4
-0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.8
+0.2
-0.0
N.D.
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