Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13676 and 13677 are separated by 222 nucleotides13677 and 13678 are separated by 410 nucleotides13678 and 13679 are separated by 303 nucleotides13679 and 13680 are separated by 484 nucleotides mRNA_5308: 13676 - Hypothetical Protein, at 421,969 to 422,926 13676 mRNA_5309: 13677 - KOG0628 Aromatic-L-amino-acid/L-histidine decarboxylase, at 423,149 to 425,154 13677 mRNA_5310: 13678 - Hypothetical Protein, at 425,565 to 427,309 13678 mRNA_5311: 13679 - Hypothetical Protein, at 427,613 to 428,578 13679 mRNA_5312: 13680 - K18182 COX16 cytochrome c oxidase assembly protein subunit 16, at 429,063 to 429,953 13680
Group Condition mRNA_5308 mRNA_5309 mRNA_5310 mRNA_5311 mRNA_5312
13676 13677 13678 13679 13680
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 -0.2 -0.1 +0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 +0.0 -0.2 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.7 -0.0 -0.1 N.D.
auxotrophy YNB Glucose -0.2 -0.7 +0.0 +0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.3 +0.3 -0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.5 +0.1 +0.2 N.D.
growth on ricinoleic acid YNB Glucose -0.5 -0.1 +0.0 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.4 +0.1 +0.0 N.D.
growth on oleic acid YNB Oleic Acid -0.2 -0.3 -0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.5 +0.2 -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.7 +0.4 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.6 +0.4 +0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.4 +0.6 -0.2 N.D.
growth on oleic acid YNB Glucose -0.0 -0.4 +0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.5 +0.2 -0.0 N.D.
auxotrophy Dropout Complete -0.1 -0.5 +0.3 +0.2 N.D.
growth on ypd YPD +0.1 -0.3 +0.3 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.0 +0.1 +0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 +0.1 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.2 +0.4 -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.8 +0.2 -0.0 N.D.
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