Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13677 and 13678 are separated by 410 nucleotides13678 and 13679 are separated by 303 nucleotides13679 and 13680 are separated by 484 nucleotides13680 and 13681 are separated by 450 nucleotides mRNA_5309: 13677 - KOG0628 Aromatic-L-amino-acid/L-histidine decarboxylase, at 423,149 to 425,154 13677 mRNA_5310: 13678 - Hypothetical Protein, at 425,565 to 427,309 13678 mRNA_5311: 13679 - Hypothetical Protein, at 427,613 to 428,578 13679 mRNA_5312: 13680 - K18182 COX16 cytochrome c oxidase assembly protein subunit 16, at 429,063 to 429,953 13680 mRNA_5313: 13681 - KOG0108 mRNA cleavage and polyadenylation factor I complex, subunit RNA15, at 430,404 to 433,324 13681
Group Condition mRNA_5309 mRNA_5310 mRNA_5311 mRNA_5312 mRNA_5313
13677 13678 13679 13680 13681
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 -0.0 -0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 +0.2 -0.0 N.D. -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.2 -0.1 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.1 +0.0 N.D. -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.1 +0.0 N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.3 -0.3 N.D. -0.3
auxotrophy YNB Glucose -0.7 +0.0 +0.2 N.D. -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.2 -0.1 N.D. -0.1
growth on oleic acid YNB Glucose -0.4 +0.1 +0.1 N.D. -0.2
growth on oleic acid YNB Oleic Acid -0.3 -0.1 +0.2 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.7 +0.4 +0.3 N.D. -0.3
growth on ypd YPD -0.3 +0.3 -0.1 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.6 -0.2 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine -0.5 +0.1 +0.2 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine -0.6 +0.4 +0.3 N.D. -0.1
auxotrophy Dropout Complete -0.5 +0.3 +0.2 N.D. +0.2
growth on ricinoleic acid YNB Glucose -0.1 +0.0 +0.1 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.1 +0.0 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.1 +0.2 N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.4 -0.1 N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.8 +0.2 -0.0 N.D. +0.3
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