Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13678 and 13679 are separated by 303 nucleotides13679 and 13680 are separated by 484 nucleotides13680 and 13681 are separated by 450 nucleotides13681 and 13682 are separated by 576 nucleotides mRNA_5310: 13678 - Hypothetical Protein, at 425,565 to 427,309 13678 mRNA_5311: 13679 - Hypothetical Protein, at 427,613 to 428,578 13679 mRNA_5312: 13680 - K18182 COX16 cytochrome c oxidase assembly protein subunit 16, at 429,063 to 429,953 13680 mRNA_5313: 13681 - KOG0108 mRNA cleavage and polyadenylation factor I complex, subunit RNA15, at 430,404 to 433,324 13681 mRNA_5314: 13682 - Hypothetical Protein, at 433,901 to 435,484 13682
Group Condition mRNA_5310 mRNA_5311 mRNA_5312 mRNA_5313 mRNA_5314
13678 13679 13680 13681 13682
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.1 N.D. -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.0 N.D. -0.3 -0.1
growth on oleic acid YNB Glucose +0.1 +0.1 N.D. -0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.1 N.D. -0.2 +0.1
growth on ypd YPD +0.3 -0.1 N.D. -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.0 N.D. -0.5 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.3 N.D. -0.3 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.0 N.D. -0.4 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.0 N.D. +0.2 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.0 N.D. +0.3 -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 N.D. +0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.1 N.D. -0.3 +0.3
growth on oleic acid YNB Oleic Acid -0.1 +0.2 N.D. -0.1 +0.1
growth on ricinoleic acid YNB Glucose +0.0 +0.1 N.D. +0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.6 -0.2 N.D. -0.1 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.4 -0.1 N.D. +0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.3 N.D. -0.3 +0.0
auxotrophy YNB Glucose +0.0 +0.2 N.D. -0.0 +0.4
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.2 N.D. +0.2 +0.4
auxotrophy Dropout Complete +0.3 +0.2 N.D. +0.2 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.4 +0.3 N.D. -0.1 +0.4
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