Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13679 and 13680 are separated by 484 nucleotides13680 and 13681 are separated by 450 nucleotides13681 and 13682 are separated by 576 nucleotides13682 and 13683 are separated by 833 nucleotides mRNA_5311: 13679 - Hypothetical Protein, at 427,613 to 428,578 13679 mRNA_5312: 13680 - K18182 COX16 cytochrome c oxidase assembly protein subunit 16, at 429,063 to 429,953 13680 mRNA_5313: 13681 - KOG0108 mRNA cleavage and polyadenylation factor I complex, subunit RNA15, at 430,404 to 433,324 13681 mRNA_5314: 13682 - Hypothetical Protein, at 433,901 to 435,484 13682 mRNA_5315: 13683 - K06158 ABCF3 ATP-binding cassette, subfamily F, member 3, at 436,318 to 439,528 13683
Group Condition mRNA_5311 mRNA_5312 mRNA_5313 mRNA_5314 mRNA_5315
13679 13680 13681 13682 13683
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. -0.5 +0.2 -1.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. -0.1 -0.1 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. -0.1 +0.0 -0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. -0.3 +0.0 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. -0.3 +0.3 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. -0.2 +0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 N.D. +0.3 -0.4 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 N.D. -0.3 +0.2 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. +0.1 -0.1 -0.1
growth on oleic acid YNB Glucose +0.1 N.D. -0.2 -0.2 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 N.D. -0.3 -0.1 +0.2
growth on ypd YPD -0.1 N.D. -0.1 -0.3 +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. +0.0 -0.2 -0.0
growth on oleic acid YNB Oleic Acid +0.2 N.D. -0.1 +0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. +0.2 -0.3 +0.2
growth on ricinoleic acid YNB Glucose +0.1 N.D. +0.1 -0.1 +0.2
auxotrophy YNB Glucose +0.2 N.D. -0.0 +0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 N.D. -0.4 +0.2 +0.6
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. +0.2 +0.4 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. -0.1 +0.4 +0.2
auxotrophy Dropout Complete +0.2 N.D. +0.2 +0.3 +0.8
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