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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13679 and 13680 are separated by 484 nucleotides
13680 and 13681 are separated by 450 nucleotides
13681 and 13682 are separated by 576 nucleotides
13682 and 13683 are separated by 833 nucleotides
mRNA_5311: 13679 - Hypothetical Protein, at 427,613 to 428,578
13679
mRNA_5312: 13680 - K18182 COX16 cytochrome c oxidase assembly protein subunit 16, at 429,063 to 429,953
13680
mRNA_5313: 13681 - KOG0108 mRNA cleavage and polyadenylation factor I complex, subunit RNA15, at 430,404 to 433,324
13681
mRNA_5314: 13682 - Hypothetical Protein, at 433,901 to 435,484
13682
mRNA_5315: 13683 - K06158 ABCF3 ATP-binding cassette, subfamily F, member 3, at 436,318 to 439,528
13683
Group
Condition
mRNA
_5311
mRNA
_5312
mRNA
_5313
mRNA
_5314
mRNA
_5315
13679
13680
13681
13682
13683
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
N.D.
-0.5
+0.2
-1.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
N.D.
-0.1
-0.1
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
N.D.
-0.1
+0.0
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
N.D.
-0.3
+0.0
-0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
N.D.
-0.3
+0.3
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
N.D.
-0.2
+0.1
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
N.D.
+0.3
-0.4
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
N.D.
-0.3
+0.2
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
N.D.
+0.1
-0.1
-0.1
growth on oleic acid
YNB Glucose
+0.1
N.D.
-0.2
-0.2
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
N.D.
-0.3
-0.1
+0.2
growth on ypd
YPD
-0.1
N.D.
-0.1
-0.3
+0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.2
N.D.
+0.0
-0.2
-0.0
growth on oleic acid
YNB Oleic Acid
+0.2
N.D.
-0.1
+0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.0
N.D.
+0.2
-0.3
+0.2
growth on ricinoleic acid
YNB Glucose
+0.1
N.D.
+0.1
-0.1
+0.2
auxotrophy
YNB Glucose
+0.2
N.D.
-0.0
+0.4
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
N.D.
-0.4
+0.2
+0.6
auxotrophy
YNB Glucose 75mM Methionine
+0.2
N.D.
+0.2
+0.4
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.3
N.D.
-0.1
+0.4
+0.2
auxotrophy
Dropout Complete
+0.2
N.D.
+0.2
+0.3
+0.8
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