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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13681 and 13682 are separated by 576 nucleotides
13682 and 13683 are separated by 833 nucleotides
13683 and 13684 are separated by 489 nucleotides
13684 and 13685 are separated by 242 nucleotides
mRNA_5313: 13681 - KOG0108 mRNA cleavage and polyadenylation factor I complex, subunit RNA15, at 430,404 to 433,324
13681
mRNA_5314: 13682 - Hypothetical Protein, at 433,901 to 435,484
13682
mRNA_5315: 13683 - K06158 ABCF3 ATP-binding cassette, subfamily F, member 3, at 436,318 to 439,528
13683
mRNA_5316: 13684 - Hypothetical Protein, at 440,018 to 441,628
13684
mRNA_5317: 13685 - K17498 SPN1, IWS1 transcription factor SPN1, at 441,871 to 444,778
13685
Group
Condition
mRNA
_5313
mRNA
_5314
mRNA
_5315
mRNA
_5316
mRNA
_5317
13681
13682
13683
13684
13685
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
+0.0
-0.7
-0.1
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
+0.2
-1.0
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
+0.3
-0.3
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.1
-0.2
+0.1
-0.6
growth on ypd
YPD
-0.1
-0.3
+0.4
-0.3
-0.2
growth on oleic acid
YNB Glucose
-0.2
-0.2
+0.1
-0.2
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.1
-0.4
+0.3
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.2
-0.0
+0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.0
-0.4
+0.1
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.1
+0.2
+0.3
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.1
-0.1
+0.0
+0.0
growth on oleic acid
YNB Oleic Acid
-0.1
+0.1
-0.2
+0.2
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
+0.2
+0.2
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
+0.2
+0.6
-0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.3
+0.2
+0.1
-0.1
auxotrophy
YNB Glucose
-0.0
+0.4
-0.1
+0.0
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.4
+0.2
+0.2
-0.4
growth on ricinoleic acid
YNB Glucose
+0.1
-0.1
+0.2
+0.3
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
-0.4
-0.2
+0.5
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.4
+0.0
+0.1
-0.2
auxotrophy
Dropout Complete
+0.2
+0.3
+0.8
+0.3
-0.1
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