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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13682 and 13683 are separated by 833 nucleotides
13683 and 13684 are separated by 489 nucleotides
13684 and 13685 are separated by 242 nucleotides
13685 and 13686 are separated by 82 nucleotides
mRNA_5314: 13682 - Hypothetical Protein, at 433,901 to 435,484
13682
mRNA_5315: 13683 - K06158 ABCF3 ATP-binding cassette, subfamily F, member 3, at 436,318 to 439,528
13683
mRNA_5316: 13684 - Hypothetical Protein, at 440,018 to 441,628
13684
mRNA_5317: 13685 - K17498 SPN1, IWS1 transcription factor SPN1, at 441,871 to 444,778
13685
mRNA_5318: 13686 - KOG4315 G-patch nucleic acid binding protein, at 444,861 to 446,150
13686
Group
Condition
mRNA
_5314
mRNA
_5315
mRNA
_5316
mRNA
_5317
mRNA
_5318
13682
13683
13684
13685
13686
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-0.7
-0.1
-0.5
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
-1.0
+0.0
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.2
+0.1
-0.6
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
-0.3
-0.2
-0.2
N.D.
growth on ypd
YPD
-0.3
+0.4
-0.3
-0.2
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.0
+0.1
-0.2
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.4
+0.3
+0.0
N.D.
growth on oleic acid
YNB Glucose
-0.2
+0.1
-0.2
+0.0
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
+0.0
+0.0
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.4
+0.1
+0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.3
+0.2
+0.1
-0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.2
+0.5
+0.1
N.D.
growth on oleic acid
YNB Oleic Acid
+0.1
-0.2
+0.2
+0.1
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.2
+0.3
-0.2
N.D.
auxotrophy
YNB Glucose
+0.4
-0.1
+0.0
-0.1
N.D.
growth on ricinoleic acid
YNB Glucose
-0.1
+0.2
+0.3
-0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.4
+0.0
+0.1
-0.2
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.4
+0.2
+0.2
-0.4
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
+0.2
+0.2
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.6
-0.2
-0.1
N.D.
auxotrophy
Dropout Complete
+0.3
+0.8
+0.3
-0.1
N.D.
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