Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13683 and 13684 are separated by 489 nucleotides13684 and 13685 are separated by 242 nucleotides13685 and 13686 are separated by 82 nucleotides13686 and 13687 are separated by 712 nucleotides mRNA_5315: 13683 - K06158 ABCF3 ATP-binding cassette, subfamily F, member 3, at 436,318 to 439,528 13683 mRNA_5316: 13684 - Hypothetical Protein, at 440,018 to 441,628 13684 mRNA_5317: 13685 - K17498 SPN1, IWS1 transcription factor SPN1, at 441,871 to 444,778 13685 mRNA_5318: 13686 - KOG4315 G-patch nucleic acid binding protein, at 444,861 to 446,150 13686 mRNA_5319: 13687 - HMMPfam-Plasma-membrane choline transporter-PF04515, at 446,863 to 449,105 13687
Group Condition mRNA_5315 mRNA_5316 mRNA_5317 mRNA_5318 mRNA_5319
13683 13684 13685 13686 13687
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.0 +0.0 -0.1 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.1 -0.5 N.D. -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.2 -0.2 N.D. -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.1 -0.6 N.D. -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.1 +0.2 N.D. -0.6
auxotrophy YNB Glucose -0.1 +0.0 -0.1 N.D. -0.3
growth on oleic acid YNB Oleic Acid -0.2 +0.2 +0.1 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 -0.2 -0.1 N.D. -0.5
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.1 -0.2 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.1 -0.2 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.3 +0.0 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.0 +0.0 N.D. -0.1
growth on oleic acid YNB Glucose +0.1 -0.2 +0.0 N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.2 -0.4 N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.2 -0.1 N.D. -0.1
growth on ypd YPD +0.4 -0.3 -0.2 N.D. +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 -0.1 N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.5 +0.1 N.D. -0.3
growth on ricinoleic acid YNB Glucose +0.2 +0.3 -0.2 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.3 -0.2 N.D. +0.3
auxotrophy Dropout Complete +0.8 +0.3 -0.1 N.D. -0.0
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