Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13693 and 13694 are separated by 288 nucleotides13694 and 13695 are separated by 251 nucleotides13695 and 13696 are separated by 762 nucleotides13696 and 13697 are separated by 148 nucleotides mRNA_5325: 13693 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF52266, at 459,771 to 461,459 13693 mRNA_5326: 13694 - K00020 mmsB, HIBADH 3-hydroxyisobutyrate dehydrogenase, at 461,748 to 463,259 13694 mRNA_5327: 13695 - Hypothetical Protein, at 463,511 to 464,845 13695 mRNA_5328: 13696 - HMMPfam-ATP adenylyltransferase-PF09830,SUPERFAMILY--SSF54197, at 465,608 to 466,886 13696 mRNA_5329: 13697 - K02212 MCM4, CDC54 DNA replication licensing factor MCM4, at 467,035 to 469,864 13697
Group Condition mRNA_5325 mRNA_5326 mRNA_5327 mRNA_5328 mRNA_5329
13693 13694 13695 13696 13697
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -0.4 +0.7 -1.4 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.1 -0.8 -0.0 -0.8
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.0 -0.4 -0.4 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.2 -2.0 +0.8 -0.0
auxotrophy YNB Glucose +0.3 -0.1 -0.3 -0.7 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.4 +0.4 -0.5 +0.0
auxotrophy Dropout Complete +0.2 -0.1 -0.2 -0.3 -0.2
growth on oleic acid YNB Oleic Acid -0.1 -0.1 +0.0 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.4 -0.4 -0.4 +0.3 -0.2
growth on ypd YPD -0.2 -0.0 +0.3 +0.1 -0.4
growth on ricinoleic acid YNB Glucose -0.1 -0.2 +0.5 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.1 +0.6 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.2 -0.0 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.1 +0.3 +0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.2 -0.2 +0.3 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.3 -0.3 +0.0 +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.1 -0.5 +0.7 -0.1
growth on oleic acid YNB Glucose -0.5 -0.1 +0.3 +0.7 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.2 -0.2 +0.8 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.2 -0.3 -0.2 +1.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.2 +0.7 +0.3 +0.4
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