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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13694 and 13695 are separated by 251 nucleotides
13695 and 13696 are separated by 762 nucleotides
13696 and 13697 are separated by 148 nucleotides
13697 and 13698 are separated by 1407 nucleotides
mRNA_5326: 13694 - K00020 mmsB, HIBADH 3-hydroxyisobutyrate dehydrogenase, at 461,748 to 463,259
13694
mRNA_5327: 13695 - Hypothetical Protein, at 463,511 to 464,845
13695
mRNA_5328: 13696 - HMMPfam-ATP adenylyltransferase-PF09830,SUPERFAMILY--SSF54197, at 465,608 to 466,886
13696
mRNA_5329: 13697 - K02212 MCM4, CDC54 DNA replication licensing factor MCM4, at 467,035 to 469,864
13697
mRNA_5330: 13698 - BLAST ZYRO0C04598p [Zygosaccharomyces rouxii], at 471,272 to 473,464
13698
Group
Condition
mRNA
_5326
mRNA
_5327
mRNA
_5328
mRNA
_5329
mRNA
_5330
13694
13695
13696
13697
13698
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.8
-0.0
-0.8
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.4
-0.4
-0.4
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-2.0
+0.8
-0.0
+0.3
auxotrophy
YNB Glucose
-0.1
-0.3
-0.7
+0.0
-0.0
auxotrophy
Dropout Complete
-0.1
-0.2
-0.3
-0.2
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
+0.7
-1.4
-0.1
+0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.4
+0.3
-0.2
+0.0
growth on oleic acid
YNB Oleic Acid
-0.1
+0.0
-0.0
-0.1
-0.3
growth on ypd
YPD
-0.0
+0.3
+0.1
-0.4
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.6
-0.3
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.0
-0.0
+0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.2
+0.3
-0.3
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.3
+0.0
+0.4
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
+0.4
-0.5
+0.0
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.3
+0.3
-0.1
-0.4
growth on ricinoleic acid
YNB Glucose
-0.2
+0.5
-0.1
-0.2
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.5
+0.7
-0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.2
+0.8
-0.1
+0.0
growth on oleic acid
YNB Glucose
-0.1
+0.3
+0.7
+0.0
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.3
-0.2
+1.0
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.7
+0.3
+0.4
+0.1
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