Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13696 and 13697 are separated by 148 nucleotides13697 and 13698 are separated by 1407 nucleotides13698 and 13699 are separated by 486 nucleotides13699 and 13700 are separated by 133 nucleotides mRNA_5328: 13696 - HMMPfam-ATP adenylyltransferase-PF09830,SUPERFAMILY--SSF54197, at 465,608 to 466,886 13696 mRNA_5329: 13697 - K02212 MCM4, CDC54 DNA replication licensing factor MCM4, at 467,035 to 469,864 13697 mRNA_5330: 13698 - BLAST ZYRO0C04598p [Zygosaccharomyces rouxii], at 471,272 to 473,464 13698 mRNA_5331: 13699 - SUPERFAMILY--SSF52047, at 473,951 to 475,290 13699 mRNA_5332: 13700 - K01904 4CL 4-coumarate--CoA ligase, at 475,424 to 477,955 13700
Group Condition mRNA_5328 mRNA_5329 mRNA_5330 mRNA_5331 mRNA_5332
13696 13697 13698 13699 13700
growth on ricinoleic acid YNB Ricinoleic Acid -1.4 -0.1 +0.4 -0.3 -0.2
growth on ypd YPD +0.1 -0.4 -0.4 -0.5 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.4 -0.5 +0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.8 -0.2 -0.0 -0.1
auxotrophy Dropout Complete -0.3 -0.2 -0.3 -0.0 -0.3
auxotrophy YNB Glucose -0.7 +0.0 -0.0 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.3 -0.1 -0.3 +0.2
growth on oleic acid YNB Oleic Acid -0.0 -0.1 -0.3 +0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 +0.0 +0.4 +0.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.1 -0.2 -0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.2 +0.0 -0.1 -0.3
growth on ricinoleic acid YNB Glucose -0.1 -0.2 +0.1 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.1 -0.4 -0.4 +0.4
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.4 +0.0 -0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.3 +0.1 +0.0 -0.0
growth on oleic acid YNB Glucose +0.7 +0.0 -0.2 -0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +1.0 +0.0 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.4 +0.1 -0.3 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.7 -0.1 +0.1 -0.2 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.8 -0.1 +0.0 +0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.8 -0.0 +0.3 +0.3 +0.2
remove
mRNA_5328
plot
remove
mRNA_5329
plot
remove
mRNA_5330
remove
mRNA_5331
plot
remove
mRNA_5332
plot