Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13699 and 13700 are separated by 133 nucleotides13700 and 13701 are separated by 235 nucleotides13701 and 13702 are separated by 246 nucleotides13702 and 13703 are separated by 299 nucleotides mRNA_5331: 13699 - SUPERFAMILY--SSF52047, at 473,951 to 475,290 13699 mRNA_5332: 13700 - K01904 4CL 4-coumarate--CoA ligase, at 475,424 to 477,955 13700 mRNA_5333: 13701 - ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SUPERFAMILY--SSF69065, at 478,191 to 479,250 13701 mRNA_5334: 13702 - K14563 NOP1, FBL rRNA 2'-O-methyltransferase fibrillarin, at 479,497 to 481,330 13702 mRNA_5335: 13703 - HMMPfam-Domain of unknown function (DUF4202)-PF13875, at 481,630 to 482,657 13703
Group Condition mRNA_5331 mRNA_5332 mRNA_5333 mRNA_5334 mRNA_5335
13699 13700 13701 13702 13703
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.0 -0.3 -1.1 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.2 -0.1 -1.2 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.2 -0.0 -0.4 -0.0
growth on oleic acid YNB Oleic Acid +0.1 -0.1 -0.2 -1.2 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.3 -0.1 -0.5 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.0 -0.1 -0.5 +0.1
growth on ricinoleic acid YNB Glucose -0.1 +0.1 -0.0 +0.2 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.3 +0.1 +0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.1 +0.3 -0.3 +0.2
growth on oleic acid YNB Glucose -0.2 -0.1 -0.1 +0.2 +0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.1 -0.4 +0.6 +0.2
auxotrophy Dropout Complete -0.0 -0.3 -0.1 -0.2 +1.0
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.3 +0.5 -0.3 +0.6
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.2 -0.1 -0.4 +0.5
growth on ypd YPD -0.5 -0.3 -0.1 +1.5 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.1 +0.3 +1.7 -0.9
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.1 +0.2 +0.4 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.4 -0.0 +1.7 -0.6
auxotrophy YNB Glucose -0.0 -0.3 +0.3 -0.0 +1.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.2 +0.0 +2.0 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.3 +0.0 +2.1 -0.1
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