Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13707 and 13708 are separated by 178 nucleotides13708 and 13709 are separated by 646 nucleotides13709 and 13710 are separated by 237 nucleotides13710 and 13711 are separated by 833 nucleotides mRNA_5339: 13707 - KOG4771 Nucleolar protein (NOP16) involved in 60S ribosomal subunit biogenesis, at 491,578 to 492,823 13707 mRNA_5340: 13708 - K01092 E3.1.3.25, IMPA, suhB myo-inositol-1(or 4)-monophosphatase, at 493,002 to 494,592 13708 mRNA_5341: 13709 - KOG0692 Pentafunctional AROM protein, at 495,239 to 496,655 13709 mRNA_5342: 13710 - KOG0692 Pentafunctional AROM protein, at 496,893 to 498,783 13710 mRNA_5343: 13711 - K01835 pgm phosphoglucomutase, at 499,617 to 502,031 13711
Group Condition mRNA_5339 mRNA_5340 mRNA_5341 mRNA_5342 mRNA_5343
13707 13708 13709 13710 13711
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 -0.7 -0.4 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.3 -0.5 -0.3 -0.1
growth on ypd YPD N.D. -0.5 -0.0 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.3 -0.1 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.3 -0.4 -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 -0.2 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.3 -0.4 -0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 -0.1 +0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 -0.1 -0.1 +0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 +0.1 -0.3 +0.0
auxotrophy YNB Glucose 75mM Arginine N.D. -0.0 -0.1 -0.1 +0.3
growth on oleic acid YNB Oleic Acid N.D. -0.0 +0.1 -0.1 +0.1
growth on ricinoleic acid YNB Glucose N.D. +0.2 -0.1 -0.0 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 -0.0 -0.0 +0.1
auxotrophy Dropout Complete N.D. -0.1 +0.0 -0.0 +0.3
auxotrophy YNB Glucose N.D. -0.1 -0.1 +0.2 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.2 -0.0 -0.2 +0.3
growth on oleic acid YNB Glucose N.D. +0.0 +0.0 -0.2 +0.5
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 +0.1 +0.5 +0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 -0.0 +0.3 +0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.2 -0.2 +0.3 +0.4
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